Gene Cpin_3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3234 
Symbol 
ID8359399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3986568 
End bp3987368 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content51% 
IMG OID644965406 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_003122902 
Protein GI256422249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.75377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TACATTTTAC CGAACAATAC CTGTTGCGCC CCACCAACCC CGTAACCGTG 
AACCTGATCG GCTGCGGCGG CAATGGCAGC AGCATGGTAC AATGGCTGAC GAGGATCAAC
TACTGTTTGC GCGAACTGGA ACATCCCGGA CTGCAGGTGC GCGTATTTGA CGGAGATGTT
GTTACCCACA ACAATAGGCT GCGGCAGGGG TTTTTAGAAG ACGAAGTAGG GATGAACAAA
GCAGCGGCGC TGGTAGCGCG CTACAACCGT TGCTCCGGCA CCCGATGGCA GGCATATGAT
TGCTTTTACA GCAGGGATAG TTTTCACCAG ATAGGAGCCG TGGTGAATGC TAATATTACC
ATTGGCTGCG TAGATAATGT ACCGGCGCGG TATGAAATAA TAGAACTGAT TAAACGCTGC
AACAGCAGGG GAGGACACCA CCGCGACCAG CCCTTTTATT ATATGGATTT AGGCAATACG
CGCAACACCG GACAGTATAT ATTTTCCACG GTGAATCCGA TAAAGCAGAT TACCTCTCCG
GACTATGAAA CGGTGAACCG GCTGTCCTTT ATCACCGACT TATACGGTGA TCTGTTGCAA
GCGGGGGCTG ATAGCGAAGA ACAGGGGCCT AGCTGCTCCG CACAGGAAGC GCTGCATCGG
CAGGATCTGT TTGTAAACCC GATCGTAGGC GTATGCGCGG GCCGGTATTT ATGGAAGCTG
TTTTCCGAAT ACCATACCTT CAGCTACGGT GGCGTGGTTA ACCTGCACAC CGAACGCTTT
CAGCCACTTA TGATTGAATA G
 
Protein sequence
MKKIHFTEQY LLRPTNPVTV NLIGCGGNGS SMVQWLTRIN YCLRELEHPG LQVRVFDGDV 
VTHNNRLRQG FLEDEVGMNK AAALVARYNR CSGTRWQAYD CFYSRDSFHQ IGAVVNANIT
IGCVDNVPAR YEIIELIKRC NSRGGHHRDQ PFYYMDLGNT RNTGQYIFST VNPIKQITSP
DYETVNRLSF ITDLYGDLLQ AGADSEEQGP SCSAQEALHR QDLFVNPIVG VCAGRYLWKL
FSEYHTFSYG GVVNLHTERF QPLMIE