| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3142 |
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| Symbol | |
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| ID | 8359307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3872385 |
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| End bp | 3873308 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965314 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003122810 |
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| Protein GI | 256422157 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAA CAGTATCAAA AAGTACATCA GACAAAAAGA ACTACATTAT CACTGGTCCG
ACATCAGGCA TTGGTTATGC AACCGCACTG GAGCTTGCCA AACATGGCAA CGTCATCCTG
ATGGGCAGGA ACCCGGATAA ACTGAACCAG GTAAAAGAAG AGATTGTAAA AGCAGGACAT
CAGGCGGTCA CCGTAGTATG TGACATGTCA GATCTGAAAA GTATTCAACA AGCCGTCGCG
AAAATTATCC AGCTCAACGT ACCTATTGCA GGACTGCTTA ATAATGCGGG AGTAATGCTG
ACAAAACCAG GTAAAAACGC GCAGGGATGG GACTTGACTT ATGCTACCAA CTATCTGGGT
GCATTCGCAT TAACAGAAGC CCTGGCGCCT TACCTTTCTG ATGGCGCGAA TGTGGCCTTT
ATTTCATCAG CGATTGAAGA TCCTGAACGT AAACCCGCCA AAGCGATGGG TATGAAAGGA
GCGCGCTTTA TTTCTGTGGC AGCAAGTGCA AATGGTGAAT GGTTGGCTGA CGGCTCTAAA
TTGGGAGGCA TAGACGCATA TGCCACCTCG AAACAATGTG TACTTGCCGC CGCTTTATAC
TTCGCCCGTG AAAATCCGCG ATTACACTTT AATGCGATTG AACCGGGGAT CACGCGTGGC
ACTCGTCTCG GCGGTGCAAA TCCAGTCGTA CAATTCATTT TCGGGCATTT AATGGCGATC
ATACCACCAT TCTCTCATTA CGCCAGTACA CCCAGAAAAT CGGCAAAAGT CATTACCCGG
GTATTGACGG ATGACTCCAA TACAAGCGGC GTTTATTTTG ACGAAAAAGC GCAGCCAATG
CGCGGATCTA TACTAGCACA TGATCCTGTT TTCCAGGAGA AGGTGGTACA CGAAACGAGG
GCTTTTCTGG CAAAGTTTTT TTAA
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| Protein sequence | MAKTVSKSTS DKKNYIITGP TSGIGYATAL ELAKHGNVIL MGRNPDKLNQ VKEEIVKAGH
QAVTVVCDMS DLKSIQQAVA KIIQLNVPIA GLLNNAGVML TKPGKNAQGW DLTYATNYLG
AFALTEALAP YLSDGANVAF ISSAIEDPER KPAKAMGMKG ARFISVAASA NGEWLADGSK
LGGIDAYATS KQCVLAAALY FARENPRLHF NAIEPGITRG TRLGGANPVV QFIFGHLMAI
IPPFSHYAST PRKSAKVITR VLTDDSNTSG VYFDEKAQPM RGSILAHDPV FQEKVVHETR
AFLAKFF
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