Gene Cpin_3096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3096 
Symbol 
ID8359261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3814365 
End bp3814979 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content47% 
IMG OID644965270 
ProductMORN variant repeat protein 
Protein accessionYP_003122766 
Protein GI256422113 
COG category[S] Function unknown 
COG ID[COG2849] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.102231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAC TGAGTGTATT TTTAATGCTG CAATTCATGG TCCTGGCGGC TTTTGCCCAG 
ATGCCCAAGG TCCGGGTCAA CAAGGTTGAC GAGCAGCAGC GCAAACAAGG GGAATGGCAG
GAGGAAATGC CTGAAGTCCG CGGAGAACCG GGTTATACCT GGGAGGGAAA CTATGTCGAT
AACAAAAAAG AAGGAATATG GAAGAAATAT GCCGTATCCG GAGGAATTAT CGCAGAAGAA
ACCTACAAAC ACGACCAGCT GAATGGCTAT GCACGTTATT TCTATCCAAA CGGTAAGGTC
AGCGCGGAAG GTGCTTTCGT GGCAATGGAC ATCAACGGTG AAGTAGACTA CTTCAGAATC
GTGGATCCGA TCACCGGAGA TGAAAAATTC GAGGAAGTAA AAAGAGATGG CAGTTCCCAG
CGTAATGGTA TGTGGAAAGT ATATGACGAA GATGGAAAGA TGATGAAGGA ATACTATAGA
CGCGGAGAGC CAGTGACAGA AGAAGAATTC GGAAAAGCGC CTGTAAAACC GGCTGCATCG
GAAAAACCTG CAACACCACC TGCACCACCT GCATTACCTC ACCAGAACCA GAAGAAAAAG
GGCAATAAAG GATAA
 
Protein sequence
MRKLSVFLML QFMVLAAFAQ MPKVRVNKVD EQQRKQGEWQ EEMPEVRGEP GYTWEGNYVD 
NKKEGIWKKY AVSGGIIAEE TYKHDQLNGY ARYFYPNGKV SAEGAFVAMD INGEVDYFRI
VDPITGDEKF EEVKRDGSSQ RNGMWKVYDE DGKMMKEYYR RGEPVTEEEF GKAPVKPAAS
EKPATPPAPP ALPHQNQKKK GNKG