| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3054 |
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| Symbol | |
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| ID | 8359219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3770578 |
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| End bp | 3771891 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644965232 |
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| Product | DNA mismatch repair protein MutS domain protein |
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| Protein accession | YP_003122728 |
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| Protein GI | 256422075 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.613085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTTTA TTGCAGACAA ACAAATGCTA GACGATTTGT CCTTGTTAGG TAAATTTAAT
CCTGGTTCTG TTTTCAGTCT TTTTAACCAG GTAAAAACCA GGGGCGCCGA GAAATTACTG
GATGCCATGT TCCTGCATCC CTTATCGGAT GTGGAAGCGA TCAACAACAG AAGTGCTGTT
TTCCGCTATT TCAATCAACA TCCTGTCAGC TTCCCTTTTG ATGAAAAGCA GCTGGAACGT
ATGGAATCCT ATATGGATGA AGGCGGTGAC GGGAGTTATA TCATGGCATT ATGGGAATTA
AGCCGGAAGA AAGTAGCATC AGTACTGGTA AAAGATGATA CCTATGACCT GACCTTAACA
GGTATAGAAA GCAGCATCTC CGTATTAAAA GCCTGTGAAA AGCTACTCAA ACAGCTGGAG
CAGGAAGGAC GCGATAACGA TCAGCCATGG GTAAAATGGT CAGAGATCGT ACGCACGATC
ACTACAGATG ACCGGTTGAA AGATTTCTCT AAGCCTGCCA GGTCTTTAAT GGATAATGTA
CGGCTGCATC ATATGCTGAC AGGCGTATTT CGTAGTCAGC TGAAAACGCT CCTTGAACTG
ATCTATGAAA CAGACCTGTA CCTGGCAGTA GCAGGCGTAG CGAAGGCAAA AGGCTTCTCC
TATGCACAGG CATTACCGAA GGATCGGAAT ATACTGGAAG CTAAAGGACT GAGACATCCG
GGGCTTGATA AGGGCGTCGC TAACTCATTG TCCTTTAATG CCGGTACGAA TGTCCTGTTT
CTTACCGGTG CAAACATGGC GGGTAAGTCA ACATTGATGA AGTCGACAGG TATTCTCATT
TATCTTGCGC ATATGGGATT CCCGGTAGCA GCCACTGAAG TGAAATTTTC TATATTGGAT
GGTATTTATT CTTCCGTGAA TGTGCCCGAT GACCTGAATA AAGGATATAG TCACTTCTAT
GCGGAAGTAC TGCGCGTGAA AAAGGTAGCA GAAGAAGTAG CTACAGATAA ATCTTTGTTT
GTCATCTTTG ATGAGCTGTT CAAAGGTACA AACGTAAAAG ATGCTTATGA CGCTACCCTG
GCGGTAACTG AAGCGTTCAC TGATTTTACA AATTGTTTCT TTATCATTTC CACGCATATA
TTTGAAGTCG GACATGCATT GAATAATGGT GGATCACAGA TCGCGTTTGA ATTCCTTCCA
ACCATCATGA ACAATAACGT GCCGCAGTAT ACATATCAGC TGCAGAAAGG TATTACTACT
GACAGACAGG GCATGATCAT TATTGAGAAT GAAGGAATAC TGGATATGTT ATAG
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| Protein sequence | MSFIADKQML DDLSLLGKFN PGSVFSLFNQ VKTRGAEKLL DAMFLHPLSD VEAINNRSAV
FRYFNQHPVS FPFDEKQLER MESYMDEGGD GSYIMALWEL SRKKVASVLV KDDTYDLTLT
GIESSISVLK ACEKLLKQLE QEGRDNDQPW VKWSEIVRTI TTDDRLKDFS KPARSLMDNV
RLHHMLTGVF RSQLKTLLEL IYETDLYLAV AGVAKAKGFS YAQALPKDRN ILEAKGLRHP
GLDKGVANSL SFNAGTNVLF LTGANMAGKS TLMKSTGILI YLAHMGFPVA ATEVKFSILD
GIYSSVNVPD DLNKGYSHFY AEVLRVKKVA EEVATDKSLF VIFDELFKGT NVKDAYDATL
AVTEAFTDFT NCFFIISTHI FEVGHALNNG GSQIAFEFLP TIMNNNVPQY TYQLQKGITT
DRQGMIIIEN EGILDML
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