| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2948 |
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| Symbol | |
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| ID | 8359111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3629293 |
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| End bp | 3630489 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644965129 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_003122627 |
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| Protein GI | 256421974 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.522825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.183052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAA ACGCCCGATT AACATATTTA CTGGAACGCC TGGTCAGCCA CAACGCTACA
GCGGAGGAGC TGGACGAGCT TAGCGCCCTG GTCGACCGTG ACGTCGCCGA TGCATCTATC
GATGATACCG AAAGCTGGCT GGAAGTTCAT GTCAATCAGC AGCTCCCCGC CTACAATCCC
CAACAATGGC GACAGGTGGC TGATCAGATC CTGCGGTCGG ATAAACTACC TGCCGATCCT
GTTGCGCCGC CGGCAACGCG TGTACACTAC CTCCACAAAT GGTGGTGGGC AGTAGCAGCC
GTCGTACTGA TAGCAGCCGG GGCCATGTAT CTTAACCGGA ACAACCCACG GCCCGTGCGC
CAGATGGTAC GCAATGCCTC ATTGGACGTT GCACCCGGAC AAACCGGCGC CATGCTCACA
CTCGCCGATG GTTCGCAGCT CGTACTGGAT AGCACCGGTA ATGGCGTCAT TACCCGGCAG
AACGGCACTT CCGTGGCAAT GCAAAACGGC GATCTGCAAT ATACACCGGG ACAGGCATTG
GCTGGACCAG TACAATATAA TACCATTAGT ACGGCCAAAG GACGGCAGTT TACTATTACG
CTGTCAGATG GCACTAAAGT ATGGCTCAAT GCCAGCAGCT CGCTACGGTT TCCGGTGGCA
TTTAACGGCT CCGACAGAAC GGTCGAATTT ACAGGTGAAG GATACTTCGA GGTGGCCGCC
AATGCCCGGC AACCATTCCG CGTGCATGTG CCGGACCAGA TCAGCCTGGA AGTACTGGGT
ACCGCCTTCA ACATCAATGC CTATACCAAT GACCGGAACA GTTATACCAC GCTGGTGAAT
GGCGGGGTAA AGATATCGCC GGCGGGAAAA ACCAGTGGCG CTGTAGTGTT AAAACCGGGT
GAGCAATTGC TGGTCACAGG CAGCCACTTC GATGTAATGA GCAATGCAAA TGTGGAACAA
GCCATCGCCT GGAAAAACGG CTTTTTTAAT TTCGACAGTG TAAGTCTGAA AGATATGATG
CGCCAGCTCG AACGCTGGTA CGATCTGGAA GTGGTATACG AAGGCAATGT GCCGGATATC
ATGTTCTTTG GGGAAATGAG CCGCAATTTG AAATTATCTG ACGTATTAAA CGGGCTGGAA
CGATCCAATG TACACTTCCG GCTGGAGGAA GGTCGTAAGC TAATCGTAAT GCCATAG
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| Protein sequence | MKPNARLTYL LERLVSHNAT AEELDELSAL VDRDVADASI DDTESWLEVH VNQQLPAYNP
QQWRQVADQI LRSDKLPADP VAPPATRVHY LHKWWWAVAA VVLIAAGAMY LNRNNPRPVR
QMVRNASLDV APGQTGAMLT LADGSQLVLD STGNGVITRQ NGTSVAMQNG DLQYTPGQAL
AGPVQYNTIS TAKGRQFTIT LSDGTKVWLN ASSSLRFPVA FNGSDRTVEF TGEGYFEVAA
NARQPFRVHV PDQISLEVLG TAFNINAYTN DRNSYTTLVN GGVKISPAGK TSGAVVLKPG
EQLLVTGSHF DVMSNANVEQ AIAWKNGFFN FDSVSLKDMM RQLERWYDLE VVYEGNVPDI
MFFGEMSRNL KLSDVLNGLE RSNVHFRLEE GRKLIVMP
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