| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2925 |
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| Symbol | |
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| ID | 8359087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3602973 |
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| End bp | 3604385 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965106 |
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| Product | Pyridoxal-dependent decarboxylase |
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| Protein accession | YP_003122605 |
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| Protein GI | 256421952 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGT TATTGAACCA GGATCTACAG CAATTAGATA ATTTCTTACA GGAGATTAAG
GATTACAGCG TGTTATTCTT ATCCAGCGTA GAGACCTTGC CAGTCAAGGC GGCGACTGCT
TCATTTGAGA ATTTTGATCT TCCGCGAAAG GGAATGGGGG CGATGCATAC GCTTTCACAA
TTCAGAAAGA GATACGAAGA ACATCTCGCG GGGAATAGTG GTCCGCGTAA CTGGGGCTTT
GTAACGGGAG GCGCAACGAT ACCAGCGATC GCCGGAGACT GGCTGACATC CGTCTTCGAT
ATGAACGCAT CAGACAGAGA CATACCGCCA TTCAAAATAG AAACAGAAAC CATCTCAATG
CTCCGGCAAC TGTTTGGGTT GCCGGATGCT TTTTCCGGAA ACTTTGTAAC TGGGGCTACC
ATGGCAAATT TCTCCGGATT GGCTATTGCA AGACAATGGT TAGGAAAGCA GCTGGGTGTT
GATGTAGCAC AGGAAGGAAT GGCTGCATTG GCAAATGCAA AGATCGTTTC CTGTACACCA
CATTCCAGCA GTGTGAAATC AATGGCCATG TTAGGCTTTG GAAGAAATGC TCTGGTAAAG
ATTCCCGCCT TACCAGACAG AGAAGCATTT GATATTGAAG CATTGAAAGA ATACCTGTTG
GCACATAAAG GAGAACCATT GATTGTGCTG GCGAGTGCAG GTACTGTTAA TACAGTTGAC
TTTGATGACC TGCAGGCAAT TGTGGCATTG AAGAAAGAGT ATAACTTCTG GCTACATGTG
GATGCAGCCT TTGGCGCATT TGCAGCATGT GTCCCTGAAT ATAAGCAGCT GTTAGATGGA
TGGGAAGAGG CAGATAGTAT CACTATTGAT GCGCACAAGT GGCTCAATGT GCCTTATGAT
GCGGCAATGG TATTCACCCG CCATTTACAG CTGCAGCTGG ATACATTTAA GAATGTAGGC
GCTGCTTACC TGGGCGATCC TGAGAAAGAT TTTAAGTACA GCAATTATAC ACCTGAGAAT
TCACGACGAT TGCGTGCATT GCCGGCCTGG TTCACATTGG TGGCCTATGG CGCCGAAGGA
TATACAGCTA TTGTGAATAA TAATATACAG TTAGCCCGTC AGTTGGGAAC ATTGATCAGT
GAGAGTGATG CTTTCCACTT ATTGGCCCCT GTCAGGTTAT GCGTTGTTTG TTTTACGCTG
CATGTAGCGG ACGAAGAAAA ACAGGCAGGC ATCGATGCAT TCCTGAAAGC ATTGAATGAT
AGCGGTAAAG TTATGATGAC GCCAACAGTT TATCAGGGCG TTCCGGCTAT CCGCGCGGCA
TTCGTCAACT GGCGCACTAC AGAAAAGGAT CTGACCATTG CATGGGAAGA TATGCTGCAA
CAGGCAGCCG GGCCTACTGT AGAAGAAGAC TGA
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| Protein sequence | MNQLLNQDLQ QLDNFLQEIK DYSVLFLSSV ETLPVKAATA SFENFDLPRK GMGAMHTLSQ
FRKRYEEHLA GNSGPRNWGF VTGGATIPAI AGDWLTSVFD MNASDRDIPP FKIETETISM
LRQLFGLPDA FSGNFVTGAT MANFSGLAIA RQWLGKQLGV DVAQEGMAAL ANAKIVSCTP
HSSSVKSMAM LGFGRNALVK IPALPDREAF DIEALKEYLL AHKGEPLIVL ASAGTVNTVD
FDDLQAIVAL KKEYNFWLHV DAAFGAFAAC VPEYKQLLDG WEEADSITID AHKWLNVPYD
AAMVFTRHLQ LQLDTFKNVG AAYLGDPEKD FKYSNYTPEN SRRLRALPAW FTLVAYGAEG
YTAIVNNNIQ LARQLGTLIS ESDAFHLLAP VRLCVVCFTL HVADEEKQAG IDAFLKALND
SGKVMMTPTV YQGVPAIRAA FVNWRTTEKD LTIAWEDMLQ QAAGPTVEED
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