Gene Cpin_2864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2864 
Symbol 
ID8359025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3544501 
End bp3545469 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content44% 
IMG OID644965044 
Productphytanoyl-CoA dioxygenase (PhyH) family 
Protein accessionYP_003122544 
Protein GI256421891 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.213439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATG AAGAGTTAAG GATGCGCTTG CTGCAATATG GGAAAGAAAT TTTCAAACCG 
GGAGATTTTC ATGATCAACT CGCCCCTGCC GTGATGGGTT ATTCAGATCT CTTATCTGCA
CACTTTGTTA TAGATGCGAA GGAAGGAAGA GCGCATATCA AAACGCCCCA CGGAAACGCC
ATCGGCTCTT TATGGGCAGC ACATTGCGGA CGGGAAGTAT TGAGAACCCA ACGCTTTTCA
AGAGGACTTG CTCATGCAAT ATCGGTAGTG CTGCTCAAAG GCAAAAAGCC CGTACACGTT
TTATATGCCG GAACAGGCCC TTTTGCCACT TTAGCCTTAC CTGTTATGAT GACATTCAAA
GCGGAAGACG TGCAGTTTAC ATTCCTGGAA ATCAACCCTG AAAGCATTAA TGTATTAAAG
CGGGTCATAG ATACTTTAGA CCTCCATGCT TACGTGAAAG ACATTCATCA GTGTGACGCG
TCTGTATGGG AAGTTGTTTC AACTGATGTG GATATCGTTA TCAGTGAGAC CATGTATAAA
GCGCTTTCAG CGGAACCGCA GGTGGCCATT ATGCTCAATC TGGTCAGTCA GCTCCCACCG
GAAACCGTTT TTTTACCTGA AGAAATTAAG GTATCACTCT GCAAATGGAA CCAGCGGGAT
CAAGTGCCGC AACAAGTAGC AGAACTGATT TCTTTTGATA AGGAATGCAT GTATTCCATC
ATCCAACAAT CATCCGGTAA AAACTGGGTA TTCAATAATC AGCAGATACA GCTTACACTG
TCGGAAGAAG AACAACTTTA TCTGGCGACA GATATAAGGG TCAATGAGGG GAATACGCTG
CTCCTGAATG AAAGTTCACT GAACCTTCTT GCAAAAGTAA AGCTTACCAA AAAACAAGGC
GCCATCAGCC TGCATTGCCG GTATAGTCTG CAAGATCCTA CCGGGTTCAG TATCAGCGAA
ATTGAATAG
 
Protein sequence
MTNEELRMRL LQYGKEIFKP GDFHDQLAPA VMGYSDLLSA HFVIDAKEGR AHIKTPHGNA 
IGSLWAAHCG REVLRTQRFS RGLAHAISVV LLKGKKPVHV LYAGTGPFAT LALPVMMTFK
AEDVQFTFLE INPESINVLK RVIDTLDLHA YVKDIHQCDA SVWEVVSTDV DIVISETMYK
ALSAEPQVAI MLNLVSQLPP ETVFLPEEIK VSLCKWNQRD QVPQQVAELI SFDKECMYSI
IQQSSGKNWV FNNQQIQLTL SEEEQLYLAT DIRVNEGNTL LLNESSLNLL AKVKLTKKQG
AISLHCRYSL QDPTGFSISE IE