Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2864 |
Symbol | |
ID | 8359025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3544501 |
End bp | 3545469 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644965044 |
Product | phytanoyl-CoA dioxygenase (PhyH) family |
Protein accession | YP_003122544 |
Protein GI | 256421891 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.213439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAATG AAGAGTTAAG GATGCGCTTG CTGCAATATG GGAAAGAAAT TTTCAAACCG GGAGATTTTC ATGATCAACT CGCCCCTGCC GTGATGGGTT ATTCAGATCT CTTATCTGCA CACTTTGTTA TAGATGCGAA GGAAGGAAGA GCGCATATCA AAACGCCCCA CGGAAACGCC ATCGGCTCTT TATGGGCAGC ACATTGCGGA CGGGAAGTAT TGAGAACCCA ACGCTTTTCA AGAGGACTTG CTCATGCAAT ATCGGTAGTG CTGCTCAAAG GCAAAAAGCC CGTACACGTT TTATATGCCG GAACAGGCCC TTTTGCCACT TTAGCCTTAC CTGTTATGAT GACATTCAAA GCGGAAGACG TGCAGTTTAC ATTCCTGGAA ATCAACCCTG AAAGCATTAA TGTATTAAAG CGGGTCATAG ATACTTTAGA CCTCCATGCT TACGTGAAAG ACATTCATCA GTGTGACGCG TCTGTATGGG AAGTTGTTTC AACTGATGTG GATATCGTTA TCAGTGAGAC CATGTATAAA GCGCTTTCAG CGGAACCGCA GGTGGCCATT ATGCTCAATC TGGTCAGTCA GCTCCCACCG GAAACCGTTT TTTTACCTGA AGAAATTAAG GTATCACTCT GCAAATGGAA CCAGCGGGAT CAAGTGCCGC AACAAGTAGC AGAACTGATT TCTTTTGATA AGGAATGCAT GTATTCCATC ATCCAACAAT CATCCGGTAA AAACTGGGTA TTCAATAATC AGCAGATACA GCTTACACTG TCGGAAGAAG AACAACTTTA TCTGGCGACA GATATAAGGG TCAATGAGGG GAATACGCTG CTCCTGAATG AAAGTTCACT GAACCTTCTT GCAAAAGTAA AGCTTACCAA AAAACAAGGC GCCATCAGCC TGCATTGCCG GTATAGTCTG CAAGATCCTA CCGGGTTCAG TATCAGCGAA ATTGAATAG
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Protein sequence | MTNEELRMRL LQYGKEIFKP GDFHDQLAPA VMGYSDLLSA HFVIDAKEGR AHIKTPHGNA IGSLWAAHCG REVLRTQRFS RGLAHAISVV LLKGKKPVHV LYAGTGPFAT LALPVMMTFK AEDVQFTFLE INPESINVLK RVIDTLDLHA YVKDIHQCDA SVWEVVSTDV DIVISETMYK ALSAEPQVAI MLNLVSQLPP ETVFLPEEIK VSLCKWNQRD QVPQQVAELI SFDKECMYSI IQQSSGKNWV FNNQQIQLTL SEEEQLYLAT DIRVNEGNTL LLNESSLNLL AKVKLTKKQG AISLHCRYSL QDPTGFSISE IE
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