| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2855 |
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| Symbol | |
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| ID | 8359016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3528681 |
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| End bp | 3529265 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644965035 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003122535 |
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| Protein GI | 256421882 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.415762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGATACG GACAATACAC AGATGAAGAA CTGTTGCAAG GCCTTCAACA AAGTAAAAAA
GGCGCCTATA ACGAGATTTA CAACAGGTAT TGGAAGAGAA TGCTCATTGT CGCATTAAAT
CACAGTGAGG ACGATTATAC TGCCAAAGAC ATTGTGCAGG AGGTGTTCAT TGACCTCTGG
GAGAAGCGTA ATAGCTACGA GATCCGGAAT CTGGCTGCTT ATCTGGCCAC TGCCGTTAAA
TTCCAGGTAT TTAAATATTA CCGGAAGGAG CAGCGTCGTG CACTGCTCGC AAAGGAAAAC
TACGTTTTTG ACGATCGTTA TGAAGAGGAA GGGCAATTAC ATGCCCGCTT TTTAAAAGAT
ATGATTGACG GCATTGTAGA AGAATTGCCG GAAAAATGCC GCCTGGTATT CCATTACAGC
CGGAATCTGG GGCTTAAAAA TGAGGAAATC GCCGAAAGGA CCGGCATCAC CAAGAAAACG
GTGGAAAATA CATTAAACAG GGCATTGCGC ATTATCCGTG GTAAACTGAG AAACCATGGT
ATCCCATTAC TGACGATCGC CCAGATCTTA TTGCTCCGAA AATAA
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| Protein sequence | MGYGQYTDEE LLQGLQQSKK GAYNEIYNRY WKRMLIVALN HSEDDYTAKD IVQEVFIDLW
EKRNSYEIRN LAAYLATAVK FQVFKYYRKE QRRALLAKEN YVFDDRYEEE GQLHARFLKD
MIDGIVEELP EKCRLVFHYS RNLGLKNEEI AERTGITKKT VENTLNRALR IIRGKLRNHG
IPLLTIAQIL LLRK
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