Gene Cpin_2839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2839 
Symbol 
ID8359000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3498800 
End bp3500143 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content46% 
IMG OID644965019 
Producthypothetical protein 
Protein accessionYP_003122519 
Protein GI256421866 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00269793 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAC CTATTATGAC TGCCATCATT AACAGCTATT GCAGGGGATT CTCCAACTGG 
AGCTGTTATG AAGGCATCCC AAAATATGAC AAGGCACTTG CGGACTATTT CTCCACTACA
GGGCATCGGT TCCATTTGCG ATTGGACTTC AGTATAGCTG GAAAGGAAGT ATTTGTTCCG
TTCCGTTATT TCTCTGAAAG CGGTTATCAT GTATTTGACT ATCCTGCAAT AGAGAGAACG
CTCTCTGATG ATCTGATCAG TACGATCGAT GCTACGCGCT TACTGACAGT AATAGCCGAT
CATCTAAAGG AGGAATATCC TGCCATACAA CTGGAACAGG CGCTGGATAA GTTATCCGCT
TTCCCTTGTC CGTCGCAGCT GGAAGGGGGG AATATGGCAG CATTTAATAC CTTATTATCG
GTTACAGATA TCAGTCGGCA CGCAGCACCG GAGCAATGGC TGGTACAGGA TGTATTACCC
ATGGTGGCTT GTCTGGGTTA CCAGCAACAG GCAGATGAAA CAAAACTGCT AAGTGCCATT
TACGAAAGAT GTGAACAATC ACTGGTGGAT CATCCCTTGT TAAACAGTAA TAAGTTATCG
GTGCCTAATG AATTGTTATC CTTTCTGTTG GGAGAGGATA AGGTGACTCG TCCTTATCCC
AATCCATTAC ACAAGGCATT CTTTTCAGCT GCGCTTATTC AGCCTGTGGG GAAAGAATCG
GTATACAGCC GGTATTTTCC GAAAGAAGAT ATCACTGTCA GTATACGGCC ATTTGATATC
GACCGTGATC TGGAAATGGT GCATGACTGG TTTAACCGTG AACATGCAAA GAAGATCTGG
AAGATGGACT GGCCCCTGCG TGAACTGGAA CTGTACTACC GCACGATGTT GCCGGGAAAC
TGGTCGCATA GTTACATAGG AGAAATCAAT GGTACGCCCA GTTACAACTT TGAAGTGTAT
TGGGTAGTGC GTGATGTGTT GGCGGACTAT TACGATGCCT TGCCAACAGA TTACGGCACC
CATCAGTTCA TTGCACCGGT AGACCCTAAG CTGAAGTTTT CCTCTCCATC CACCCAATGT
ATGCTTGACT GGGTATTTGC GCATCCGGAA GTGGGTAAGA TGGTAGGCGA GGGATCTGTG
GAATCTCTGG CTGCATTAAT GAACAAAGCA CATGTTGGCT TCCGTGTAGA GAAGGTCATA
CAGCTGCCAC ATAAAAAGGC CAATCTCAAT TTCTGTTACC GTGAATGGTA TTGGGCGAAA
TTTCCGGAGA ACCAGCATCT CGCTGCACAA AACACCATTC CAACAATTAA ACAAACAACT
CATGAAACAC GCTCCCGTAT ATAA
 
Protein sequence
MNTPIMTAII NSYCRGFSNW SCYEGIPKYD KALADYFSTT GHRFHLRLDF SIAGKEVFVP 
FRYFSESGYH VFDYPAIERT LSDDLISTID ATRLLTVIAD HLKEEYPAIQ LEQALDKLSA
FPCPSQLEGG NMAAFNTLLS VTDISRHAAP EQWLVQDVLP MVACLGYQQQ ADETKLLSAI
YERCEQSLVD HPLLNSNKLS VPNELLSFLL GEDKVTRPYP NPLHKAFFSA ALIQPVGKES
VYSRYFPKED ITVSIRPFDI DRDLEMVHDW FNREHAKKIW KMDWPLRELE LYYRTMLPGN
WSHSYIGEIN GTPSYNFEVY WVVRDVLADY YDALPTDYGT HQFIAPVDPK LKFSSPSTQC
MLDWVFAHPE VGKMVGEGSV ESLAALMNKA HVGFRVEKVI QLPHKKANLN FCYREWYWAK
FPENQHLAAQ NTIPTIKQTT HETRSRI