Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2839 |
Symbol | |
ID | 8359000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3498800 |
End bp | 3500143 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644965019 |
Product | hypothetical protein |
Protein accession | YP_003122519 |
Protein GI | 256421866 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00269793 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACAC CTATTATGAC TGCCATCATT AACAGCTATT GCAGGGGATT CTCCAACTGG AGCTGTTATG AAGGCATCCC AAAATATGAC AAGGCACTTG CGGACTATTT CTCCACTACA GGGCATCGGT TCCATTTGCG ATTGGACTTC AGTATAGCTG GAAAGGAAGT ATTTGTTCCG TTCCGTTATT TCTCTGAAAG CGGTTATCAT GTATTTGACT ATCCTGCAAT AGAGAGAACG CTCTCTGATG ATCTGATCAG TACGATCGAT GCTACGCGCT TACTGACAGT AATAGCCGAT CATCTAAAGG AGGAATATCC TGCCATACAA CTGGAACAGG CGCTGGATAA GTTATCCGCT TTCCCTTGTC CGTCGCAGCT GGAAGGGGGG AATATGGCAG CATTTAATAC CTTATTATCG GTTACAGATA TCAGTCGGCA CGCAGCACCG GAGCAATGGC TGGTACAGGA TGTATTACCC ATGGTGGCTT GTCTGGGTTA CCAGCAACAG GCAGATGAAA CAAAACTGCT AAGTGCCATT TACGAAAGAT GTGAACAATC ACTGGTGGAT CATCCCTTGT TAAACAGTAA TAAGTTATCG GTGCCTAATG AATTGTTATC CTTTCTGTTG GGAGAGGATA AGGTGACTCG TCCTTATCCC AATCCATTAC ACAAGGCATT CTTTTCAGCT GCGCTTATTC AGCCTGTGGG GAAAGAATCG GTATACAGCC GGTATTTTCC GAAAGAAGAT ATCACTGTCA GTATACGGCC ATTTGATATC GACCGTGATC TGGAAATGGT GCATGACTGG TTTAACCGTG AACATGCAAA GAAGATCTGG AAGATGGACT GGCCCCTGCG TGAACTGGAA CTGTACTACC GCACGATGTT GCCGGGAAAC TGGTCGCATA GTTACATAGG AGAAATCAAT GGTACGCCCA GTTACAACTT TGAAGTGTAT TGGGTAGTGC GTGATGTGTT GGCGGACTAT TACGATGCCT TGCCAACAGA TTACGGCACC CATCAGTTCA TTGCACCGGT AGACCCTAAG CTGAAGTTTT CCTCTCCATC CACCCAATGT ATGCTTGACT GGGTATTTGC GCATCCGGAA GTGGGTAAGA TGGTAGGCGA GGGATCTGTG GAATCTCTGG CTGCATTAAT GAACAAAGCA CATGTTGGCT TCCGTGTAGA GAAGGTCATA CAGCTGCCAC ATAAAAAGGC CAATCTCAAT TTCTGTTACC GTGAATGGTA TTGGGCGAAA TTTCCGGAGA ACCAGCATCT CGCTGCACAA AACACCATTC CAACAATTAA ACAAACAACT CATGAAACAC GCTCCCGTAT ATAA
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Protein sequence | MNTPIMTAII NSYCRGFSNW SCYEGIPKYD KALADYFSTT GHRFHLRLDF SIAGKEVFVP FRYFSESGYH VFDYPAIERT LSDDLISTID ATRLLTVIAD HLKEEYPAIQ LEQALDKLSA FPCPSQLEGG NMAAFNTLLS VTDISRHAAP EQWLVQDVLP MVACLGYQQQ ADETKLLSAI YERCEQSLVD HPLLNSNKLS VPNELLSFLL GEDKVTRPYP NPLHKAFFSA ALIQPVGKES VYSRYFPKED ITVSIRPFDI DRDLEMVHDW FNREHAKKIW KMDWPLRELE LYYRTMLPGN WSHSYIGEIN GTPSYNFEVY WVVRDVLADY YDALPTDYGT HQFIAPVDPK LKFSSPSTQC MLDWVFAHPE VGKMVGEGSV ESLAALMNKA HVGFRVEKVI QLPHKKANLN FCYREWYWAK FPENQHLAAQ NTIPTIKQTT HETRSRI
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