| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2835 |
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| Symbol | |
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| ID | 8358996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3492795 |
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| End bp | 3494318 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965015 |
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| Product | Pyridoxal-dependent decarboxylase |
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| Protein accession | YP_003122515 |
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| Protein GI | 256421862 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.579316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACTA CCGCATTTGC AGGCTGGGAA CAGCCGCTGC AGGACATTGT ATTGCCTGTA
AAAGAGACCT ATAAAGATAT TTTTCATCAA GGATCGGCTG CTGAATATGA AAACGCCATC
AATGGCGCAC GCGAACTGGT CACTAATTTT CTGCACCGGA ATCGCCAGCC TTTCAGCGGC
GTCTCTTCTA CTGCACTGAG AGCAGCATTT GCAGCAGTAG ATTTTGATAC CCCATTACCT
GATTACGAAA GTCTCCTGCA GGAAGTACAG GAACTATATG TAAAACATGC CACTGCCTTT
CATCTGCCAG CATACATCGC ACATCTGAAT TGCCCGGTGG TGATACCGGC AGTTGCAGCT
GAAGTACTGA TTGCTGCCAT CAATTCTTCT CAGGATACCT GGGACCAGAG TGCAGGCGGT
ACCCTGATGG AACAACAGCT GATTAGCTGG ACGGCACGTG AAATTGGCTT CGGTACAGTT
GCTGATGGTG TATTTACAGC GGGTGGTTCA CAGAGTAACC TGATGGGTCT ATTACTAGCC
AGAGATCACT ATGCGATTAC AAACGGCGGT CATAATATTA AAAAGCAGGG CTTACCTGGG
GATGCTTCCC GTTATCGCAT TTTCATTTCA GAAAAAGCAC ATTTCAGCAA CCATAAAGGC
GCTGCATTGT TAGGATTGGG GGAGCAGGCA TTAGTAGAAA TAAAAACAGA TGCACGCTTC
CGTATGGATG CGGAACTGCT GGAAGAAGCG ATTGCCAGGG AGATACAACA AGGGAATATT
CCTATTGCAG TCGTGGCTAC CGCAGGCACC ACTGATTTCG GTAACCTGGA TCCGCTGGCT
GATATAGGCC GTATCGCGGC TAAATACAAC CTGTGGTATC ATATAGATGC TGCCTATGGA
TGTGGGCTGC TGCTGACGGA GAAATACCGT CATTTACTGA ATGGTATGGA AACAGCACAT
TCTGTTACGA TCGACTATCA CAAATCATTC TTTCAGCCTA TCAGCAGCAG TGCCTTTATC
GTGAAGGATA AACAATACCT GCGGCTGTTA CGTATGCATG TCGACTATCT CAATCCAAAG
GATGAAGATT ACGACGATCT GAACCAGATC AATAAGTCCA TCATGCAGAG TACCCGTCGC
TTTGATGCAT TGAAGTTGTG GTTCACCTTG AGACTGATGG GTAAACAGAA ACTCGGTGCG
TATACGGAAA CCATCATCGA AACAGCGGAA AAAGCTGCGG AAGTCATCGG ACTGGATCCT
GAACTGGAAC TGCTGAGTTA TTCGGATATC GGTGTCATCC TGTTCAGATA TGCACCGGAA
CAGTATAATC CTGCCGATCT GGATGCCCTG AACCAATACA TCAAAAAGAC GATGTTCAAC
ACCGGATTGG TATTAGTGGC AAGTACACGT GTCAACGGTA ACTTCTATCT GAAGTTTACT
ATGCTGAATC CGTTGACCAC CCTGGACGAT GTACATTTCA TTCTTAACAC CATTAAAGAG
ACTGGTGCTG CATGGCGCCA ATAA
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| Protein sequence | MSTTAFAGWE QPLQDIVLPV KETYKDIFHQ GSAAEYENAI NGARELVTNF LHRNRQPFSG
VSSTALRAAF AAVDFDTPLP DYESLLQEVQ ELYVKHATAF HLPAYIAHLN CPVVIPAVAA
EVLIAAINSS QDTWDQSAGG TLMEQQLISW TAREIGFGTV ADGVFTAGGS QSNLMGLLLA
RDHYAITNGG HNIKKQGLPG DASRYRIFIS EKAHFSNHKG AALLGLGEQA LVEIKTDARF
RMDAELLEEA IAREIQQGNI PIAVVATAGT TDFGNLDPLA DIGRIAAKYN LWYHIDAAYG
CGLLLTEKYR HLLNGMETAH SVTIDYHKSF FQPISSSAFI VKDKQYLRLL RMHVDYLNPK
DEDYDDLNQI NKSIMQSTRR FDALKLWFTL RLMGKQKLGA YTETIIETAE KAAEVIGLDP
ELELLSYSDI GVILFRYAPE QYNPADLDAL NQYIKKTMFN TGLVLVASTR VNGNFYLKFT
MLNPLTTLDD VHFILNTIKE TGAAWRQ
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