Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2832 |
Symbol | |
ID | 8358993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3489833 |
End bp | 3490216 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644965012 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003122512 |
Protein GI | 256421859 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0139724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAAA GCATTCCAGC GAATTATTTA AACCGTAAAG AGGAAATAGC CGCACAGTTC ATGCAGATAC TGAACGCCCA TATCGATGAT TTTATGGCGG GAAGGGTTAA TAAGATGTAT GAACTGAAAG AGATCGCTCA GGTCATGTGT CTGCACCCCG GACATGTGAG TCATATTGTC AAGTTACATA CGGGGCATCA TGCCTGTTAT TTTTATGAAC ACCGTATCCT GGAAGAGGCA AAAAAGCTAT TGGCAGACCC TTCACTGTCC ATTAAAAATA TAGCGCATCG CCTGGACTAC GATGTATCCA ATTTTACTAA GTTCTTTAAA CGATTTACCG GACAGACACC TTCCGCTTAT AGAAAGTCAC TTTCAGACAA CTGA
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Protein sequence | MGKSIPANYL NRKEEIAAQF MQILNAHIDD FMAGRVNKMY ELKEIAQVMC LHPGHVSHIV KLHTGHHACY FYEHRILEEA KKLLADPSLS IKNIAHRLDY DVSNFTKFFK RFTGQTPSAY RKSLSDN
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