Gene Cpin_2832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2832 
Symbol 
ID8358993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3489833 
End bp3490216 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content42% 
IMG OID644965012 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003122512 
Protein GI256421859 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0139724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAAA GCATTCCAGC GAATTATTTA AACCGTAAAG AGGAAATAGC CGCACAGTTC 
ATGCAGATAC TGAACGCCCA TATCGATGAT TTTATGGCGG GAAGGGTTAA TAAGATGTAT
GAACTGAAAG AGATCGCTCA GGTCATGTGT CTGCACCCCG GACATGTGAG TCATATTGTC
AAGTTACATA CGGGGCATCA TGCCTGTTAT TTTTATGAAC ACCGTATCCT GGAAGAGGCA
AAAAAGCTAT TGGCAGACCC TTCACTGTCC ATTAAAAATA TAGCGCATCG CCTGGACTAC
GATGTATCCA ATTTTACTAA GTTCTTTAAA CGATTTACCG GACAGACACC TTCCGCTTAT
AGAAAGTCAC TTTCAGACAA CTGA
 
Protein sequence
MGKSIPANYL NRKEEIAAQF MQILNAHIDD FMAGRVNKMY ELKEIAQVMC LHPGHVSHIV 
KLHTGHHACY FYEHRILEEA KKLLADPSLS IKNIAHRLDY DVSNFTKFFK RFTGQTPSAY
RKSLSDN