Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2814 |
Symbol | |
ID | 8358975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3465174 |
End bp | 3468305 |
Gene Length | 3132 bp |
Protein Length | 1043 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644964994 |
Product | hypothetical protein |
Protein accession | YP_003122494 |
Protein GI | 256421841 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGGCA CTACAACACT TCCCAGTCGT TATCCGGGTA TAGTCGCTTT TGATGAAAAA CAGCACTCCC TTTTCTTTGG CCGGAGCCGG GAGAAAAAGG AGCTGTTGCA GATGTTGAAA AACGAGCGGA CCATTGTATT ATTTGCCAAA TCCGGTGTAG GTAAATCTTC GCTGATCAAT GCCGGACTTA TCCCCTATAT GCAGGAAGAC GGATTTTACC CGATTAAGAT CCGCTTTCAG TACACGGAGT CTGGTCGCAT GAAAACACCC TTACAGATAT TACATGAGGT GATCTCTTAT AAAATTAAAA AAGAAGGGAC CATTCAACAA CGGTCAGCTG ATATTCTTTT CGATAAAGAG AAACCCCGCC TATGGGAATT GTTTAAGGTA CTTGAGTTCC CGGTATATGA GGAGAAGAAA GGCATAAATG ATTATCTGGT CAAAGAGCTC CTGGAACAAA ACACAGGCAC GGCTGCAAAT GAAGTAATCA CAGATAAAAT AAGCCGGCAG CAAATCCCTG TGCTGATCTT CGACCAGTTT GAAGAGTTCT TTAACTTCCC TATAGCACAG CAACACGACT TTCTCGCAGA ACTTGCAGAG TTATTGCATG AGATGTGTCC AAACCGCATA CTTGAATGGC TACGTTCTTT CAGCAGTGCA TCAAGAACAG AGGAAATGAT CATGTGGTCT AAACAACCCA TTATCAAATG TATATTCGCC ATACGCGGGG ATAAGCTGGC AGAACTGGAT TCCCTACGCA GATATATTCC ATTGATTCTG CGTAACAGAT ACCGCCTCGG GGCATTAAAT ACCATCAATG CCAGGGAAGC GGTTACAGGA CCGGCCAGTT TATCTGATCA GGAATTTATA TCCCCTCCCT TCAAAATAGA CAAACTGTGG CTGCAAGCTG TTCTCAATAA ATTAACCGGG AACCAGAAAA CGCCTAATAG TGAGACATCA CTGGACGACG AGAAAAAGTA TATACCAGAA ACAGGTATTG ACGGGTCACA GCTGCAGAAA ATATGTTCAT ATATCGAACA AAAAGTCACA GAAAAAAAGA CACCAGGGTT AGTGGTGAAC GAGGATACAA TAGGAATACT GGATGTTGAA AAAGTGCTGG ATAGCTTTTA CGAGGACCAA CTTATGAAAA TCGGAAAGGA CCAGGACATT GCCTTGTGCC GGAAAATTAT CGAAGATCAT CTGGTAGCCG GCGGTGGACG CACCAGTCTG ACGGAAGGGC AGATCACAGA ATTGCTGGGG AACAATACGC ATTTACTGGA AAAGATGATG GAGGTGCGTC TGGTAAAGGA AGAATTTACG CATCTCGGGA AGACATTTGA GCTTAGTCAT GATACACTCG TACGGGCTGT GACGAAGTAT GCAATCATTA ATAAAGAGAA ACGACTAGAA TCGGAGAAAA AAATACTGGA AATACAAAAG AAAACGCAAT CGCGTTATAC AAGGATTTTC GTTTTATTAA CGTTATTCAT TTTTCTGTTA TTTATTTATG TATTAAACAC AAGCAGAAAA GCAACCAAAT ATCTCAATAA AAGTCTGCTG CAACAGGGCC AGGCATATTA TAATTCCAAT AATCACCGCA CTGCTTTTAG AATATGGTCT AACAATAACA GTTTTGTATT ATTTGACCGA CCAGGTCAAA ACCGGTTGTC CGCAAAACTC GATTCTTCTT TCTTTTATGA TATTTCAGGT GGTAAACGGA TAGAATGGTT ACCTCCTAAT CATTATGTCG TACAGGAAAA TCAAATGTTA TTGAATATAT ATACCATTAC TCCTGGCCAG GAAAATCAAC TGCAGGTAAA ATCCTACACC GATCTTAAAT TATATGCCCA TTCTAGCTCC AACAACTACT TGCTATGTAA GAATTCAAAA AGCAAGCTAA TCATATACGA TGTCGTTGCT AATGATACAT TCAGTATTGC ACAAGAGTAT GTTTTACCAA AACAATTTAT AAAAGATGTT GGCAAAGGAA AAGTGCCTGA TTATGATCCT GAGGAGGAAC CAGGAATCGA AAGTTTCGTC GGGGCAAATG ACTTCATATG GTTTAAGACG AAAAGAAATG TGGTCACGGT ATACGATCTA AAAAATAGAC GGCCTGTCAA TATAAATCTC ATGATTACTT CAGATGACCC GTCAGAATCC ATGTCATCTG CAACAATATC TCCAGACGGG AAATTAATGG CTTTTTCTGA CACGACAAGA AAAGATAGAA TGTTAATCGT TTACGACATC TCCAATCCGA GGCAACCAGT GCTGAGAGAA AAAACACCTA TAACAACACT CATTACAGAA ACAAACTCAA ATGAGTCCAT TGTTTATAAA CACAACGATT CCATCTATTT TTCCTCTTAT AAAGATGGCT GGCGTCATAC CGCCAGCAAA CGCGACAAAC TACAGAGAAT ATTTTCCTTC AGAGAACGAA AATGTATCAT TTATATGTCA GATACAACCG GCATCAAGAT CTGCGACATA TACGGAAATA TCATAACACG TATTGCCGAT TACAACCGGA CTTATATTAC AAATCCTGAC TTCGATCCCC GACGACAATA TACACTGGGC CTATCATTAA GCAACGGCAT ATTAACATAT GTAAATAACG CGCGAATACT CAAATCATAT AACCTCCTCC CGTTTAAAGA AATTCGGACG TTAAGAGTTG TTCGAGGTGT TTCACCTAAT AGAGAATATT ATATCCGTTT GGATTCAATA GGACACTTAT CAATCCGGCG GATTGACAAC AACCAGATTA TCTTCCCATT TGGGGGCGAG AATGCCATCA TGCCTAAATT AGTCAATTAT GGTATAGTGA GACCACAGTG TTATTTTAAT CCTCAGAGCA CAATTATTGC CTATCTGAGA GACAGTAGTG ACGGCCATCA CTATCTGGAA GCAGTAGCGC TGGATAAAAA AGAAATTATA CATACGCAGC GTATAGACAA CTCTACATCA CTCCTTTCTT TCGATGGAGA AAAAAACGTC ATGCTTGAAA ACGAGGAAGA TAACATTGGC ATAATCATTC TAAATAATCA AAAACGTACG CAGCAATATT TCAACAAATT ATATCCTCAT TTCACCGATG CTGAAAAGAA AATACTGGAT GATAATCTTT AA
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Protein sequence | MIGTTTLPSR YPGIVAFDEK QHSLFFGRSR EKKELLQMLK NERTIVLFAK SGVGKSSLIN AGLIPYMQED GFYPIKIRFQ YTESGRMKTP LQILHEVISY KIKKEGTIQQ RSADILFDKE KPRLWELFKV LEFPVYEEKK GINDYLVKEL LEQNTGTAAN EVITDKISRQ QIPVLIFDQF EEFFNFPIAQ QHDFLAELAE LLHEMCPNRI LEWLRSFSSA SRTEEMIMWS KQPIIKCIFA IRGDKLAELD SLRRYIPLIL RNRYRLGALN TINAREAVTG PASLSDQEFI SPPFKIDKLW LQAVLNKLTG NQKTPNSETS LDDEKKYIPE TGIDGSQLQK ICSYIEQKVT EKKTPGLVVN EDTIGILDVE KVLDSFYEDQ LMKIGKDQDI ALCRKIIEDH LVAGGGRTSL TEGQITELLG NNTHLLEKMM EVRLVKEEFT HLGKTFELSH DTLVRAVTKY AIINKEKRLE SEKKILEIQK KTQSRYTRIF VLLTLFIFLL FIYVLNTSRK ATKYLNKSLL QQGQAYYNSN NHRTAFRIWS NNNSFVLFDR PGQNRLSAKL DSSFFYDISG GKRIEWLPPN HYVVQENQML LNIYTITPGQ ENQLQVKSYT DLKLYAHSSS NNYLLCKNSK SKLIIYDVVA NDTFSIAQEY VLPKQFIKDV GKGKVPDYDP EEEPGIESFV GANDFIWFKT KRNVVTVYDL KNRRPVNINL MITSDDPSES MSSATISPDG KLMAFSDTTR KDRMLIVYDI SNPRQPVLRE KTPITTLITE TNSNESIVYK HNDSIYFSSY KDGWRHTASK RDKLQRIFSF RERKCIIYMS DTTGIKICDI YGNIITRIAD YNRTYITNPD FDPRRQYTLG LSLSNGILTY VNNARILKSY NLLPFKEIRT LRVVRGVSPN REYYIRLDSI GHLSIRRIDN NQIIFPFGGE NAIMPKLVNY GIVRPQCYFN PQSTIIAYLR DSSDGHHYLE AVALDKKEII HTQRIDNSTS LLSFDGEKNV MLENEEDNIG IIILNNQKRT QQYFNKLYPH FTDAEKKILD DNL
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