Gene Cpin_2814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2814 
Symbol 
ID8358975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3465174 
End bp3468305 
Gene Length3132 bp 
Protein Length1043 aa 
Translation table11 
GC content40% 
IMG OID644964994 
Producthypothetical protein 
Protein accessionYP_003122494 
Protein GI256421841 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGGCA CTACAACACT TCCCAGTCGT TATCCGGGTA TAGTCGCTTT TGATGAAAAA 
CAGCACTCCC TTTTCTTTGG CCGGAGCCGG GAGAAAAAGG AGCTGTTGCA GATGTTGAAA
AACGAGCGGA CCATTGTATT ATTTGCCAAA TCCGGTGTAG GTAAATCTTC GCTGATCAAT
GCCGGACTTA TCCCCTATAT GCAGGAAGAC GGATTTTACC CGATTAAGAT CCGCTTTCAG
TACACGGAGT CTGGTCGCAT GAAAACACCC TTACAGATAT TACATGAGGT GATCTCTTAT
AAAATTAAAA AAGAAGGGAC CATTCAACAA CGGTCAGCTG ATATTCTTTT CGATAAAGAG
AAACCCCGCC TATGGGAATT GTTTAAGGTA CTTGAGTTCC CGGTATATGA GGAGAAGAAA
GGCATAAATG ATTATCTGGT CAAAGAGCTC CTGGAACAAA ACACAGGCAC GGCTGCAAAT
GAAGTAATCA CAGATAAAAT AAGCCGGCAG CAAATCCCTG TGCTGATCTT CGACCAGTTT
GAAGAGTTCT TTAACTTCCC TATAGCACAG CAACACGACT TTCTCGCAGA ACTTGCAGAG
TTATTGCATG AGATGTGTCC AAACCGCATA CTTGAATGGC TACGTTCTTT CAGCAGTGCA
TCAAGAACAG AGGAAATGAT CATGTGGTCT AAACAACCCA TTATCAAATG TATATTCGCC
ATACGCGGGG ATAAGCTGGC AGAACTGGAT TCCCTACGCA GATATATTCC ATTGATTCTG
CGTAACAGAT ACCGCCTCGG GGCATTAAAT ACCATCAATG CCAGGGAAGC GGTTACAGGA
CCGGCCAGTT TATCTGATCA GGAATTTATA TCCCCTCCCT TCAAAATAGA CAAACTGTGG
CTGCAAGCTG TTCTCAATAA ATTAACCGGG AACCAGAAAA CGCCTAATAG TGAGACATCA
CTGGACGACG AGAAAAAGTA TATACCAGAA ACAGGTATTG ACGGGTCACA GCTGCAGAAA
ATATGTTCAT ATATCGAACA AAAAGTCACA GAAAAAAAGA CACCAGGGTT AGTGGTGAAC
GAGGATACAA TAGGAATACT GGATGTTGAA AAAGTGCTGG ATAGCTTTTA CGAGGACCAA
CTTATGAAAA TCGGAAAGGA CCAGGACATT GCCTTGTGCC GGAAAATTAT CGAAGATCAT
CTGGTAGCCG GCGGTGGACG CACCAGTCTG ACGGAAGGGC AGATCACAGA ATTGCTGGGG
AACAATACGC ATTTACTGGA AAAGATGATG GAGGTGCGTC TGGTAAAGGA AGAATTTACG
CATCTCGGGA AGACATTTGA GCTTAGTCAT GATACACTCG TACGGGCTGT GACGAAGTAT
GCAATCATTA ATAAAGAGAA ACGACTAGAA TCGGAGAAAA AAATACTGGA AATACAAAAG
AAAACGCAAT CGCGTTATAC AAGGATTTTC GTTTTATTAA CGTTATTCAT TTTTCTGTTA
TTTATTTATG TATTAAACAC AAGCAGAAAA GCAACCAAAT ATCTCAATAA AAGTCTGCTG
CAACAGGGCC AGGCATATTA TAATTCCAAT AATCACCGCA CTGCTTTTAG AATATGGTCT
AACAATAACA GTTTTGTATT ATTTGACCGA CCAGGTCAAA ACCGGTTGTC CGCAAAACTC
GATTCTTCTT TCTTTTATGA TATTTCAGGT GGTAAACGGA TAGAATGGTT ACCTCCTAAT
CATTATGTCG TACAGGAAAA TCAAATGTTA TTGAATATAT ATACCATTAC TCCTGGCCAG
GAAAATCAAC TGCAGGTAAA ATCCTACACC GATCTTAAAT TATATGCCCA TTCTAGCTCC
AACAACTACT TGCTATGTAA GAATTCAAAA AGCAAGCTAA TCATATACGA TGTCGTTGCT
AATGATACAT TCAGTATTGC ACAAGAGTAT GTTTTACCAA AACAATTTAT AAAAGATGTT
GGCAAAGGAA AAGTGCCTGA TTATGATCCT GAGGAGGAAC CAGGAATCGA AAGTTTCGTC
GGGGCAAATG ACTTCATATG GTTTAAGACG AAAAGAAATG TGGTCACGGT ATACGATCTA
AAAAATAGAC GGCCTGTCAA TATAAATCTC ATGATTACTT CAGATGACCC GTCAGAATCC
ATGTCATCTG CAACAATATC TCCAGACGGG AAATTAATGG CTTTTTCTGA CACGACAAGA
AAAGATAGAA TGTTAATCGT TTACGACATC TCCAATCCGA GGCAACCAGT GCTGAGAGAA
AAAACACCTA TAACAACACT CATTACAGAA ACAAACTCAA ATGAGTCCAT TGTTTATAAA
CACAACGATT CCATCTATTT TTCCTCTTAT AAAGATGGCT GGCGTCATAC CGCCAGCAAA
CGCGACAAAC TACAGAGAAT ATTTTCCTTC AGAGAACGAA AATGTATCAT TTATATGTCA
GATACAACCG GCATCAAGAT CTGCGACATA TACGGAAATA TCATAACACG TATTGCCGAT
TACAACCGGA CTTATATTAC AAATCCTGAC TTCGATCCCC GACGACAATA TACACTGGGC
CTATCATTAA GCAACGGCAT ATTAACATAT GTAAATAACG CGCGAATACT CAAATCATAT
AACCTCCTCC CGTTTAAAGA AATTCGGACG TTAAGAGTTG TTCGAGGTGT TTCACCTAAT
AGAGAATATT ATATCCGTTT GGATTCAATA GGACACTTAT CAATCCGGCG GATTGACAAC
AACCAGATTA TCTTCCCATT TGGGGGCGAG AATGCCATCA TGCCTAAATT AGTCAATTAT
GGTATAGTGA GACCACAGTG TTATTTTAAT CCTCAGAGCA CAATTATTGC CTATCTGAGA
GACAGTAGTG ACGGCCATCA CTATCTGGAA GCAGTAGCGC TGGATAAAAA AGAAATTATA
CATACGCAGC GTATAGACAA CTCTACATCA CTCCTTTCTT TCGATGGAGA AAAAAACGTC
ATGCTTGAAA ACGAGGAAGA TAACATTGGC ATAATCATTC TAAATAATCA AAAACGTACG
CAGCAATATT TCAACAAATT ATATCCTCAT TTCACCGATG CTGAAAAGAA AATACTGGAT
GATAATCTTT AA
 
Protein sequence
MIGTTTLPSR YPGIVAFDEK QHSLFFGRSR EKKELLQMLK NERTIVLFAK SGVGKSSLIN 
AGLIPYMQED GFYPIKIRFQ YTESGRMKTP LQILHEVISY KIKKEGTIQQ RSADILFDKE
KPRLWELFKV LEFPVYEEKK GINDYLVKEL LEQNTGTAAN EVITDKISRQ QIPVLIFDQF
EEFFNFPIAQ QHDFLAELAE LLHEMCPNRI LEWLRSFSSA SRTEEMIMWS KQPIIKCIFA
IRGDKLAELD SLRRYIPLIL RNRYRLGALN TINAREAVTG PASLSDQEFI SPPFKIDKLW
LQAVLNKLTG NQKTPNSETS LDDEKKYIPE TGIDGSQLQK ICSYIEQKVT EKKTPGLVVN
EDTIGILDVE KVLDSFYEDQ LMKIGKDQDI ALCRKIIEDH LVAGGGRTSL TEGQITELLG
NNTHLLEKMM EVRLVKEEFT HLGKTFELSH DTLVRAVTKY AIINKEKRLE SEKKILEIQK
KTQSRYTRIF VLLTLFIFLL FIYVLNTSRK ATKYLNKSLL QQGQAYYNSN NHRTAFRIWS
NNNSFVLFDR PGQNRLSAKL DSSFFYDISG GKRIEWLPPN HYVVQENQML LNIYTITPGQ
ENQLQVKSYT DLKLYAHSSS NNYLLCKNSK SKLIIYDVVA NDTFSIAQEY VLPKQFIKDV
GKGKVPDYDP EEEPGIESFV GANDFIWFKT KRNVVTVYDL KNRRPVNINL MITSDDPSES
MSSATISPDG KLMAFSDTTR KDRMLIVYDI SNPRQPVLRE KTPITTLITE TNSNESIVYK
HNDSIYFSSY KDGWRHTASK RDKLQRIFSF RERKCIIYMS DTTGIKICDI YGNIITRIAD
YNRTYITNPD FDPRRQYTLG LSLSNGILTY VNNARILKSY NLLPFKEIRT LRVVRGVSPN
REYYIRLDSI GHLSIRRIDN NQIIFPFGGE NAIMPKLVNY GIVRPQCYFN PQSTIIAYLR
DSSDGHHYLE AVALDKKEII HTQRIDNSTS LLSFDGEKNV MLENEEDNIG IIILNNQKRT
QQYFNKLYPH FTDAEKKILD DNL