| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2764 |
|---|
| Symbol | |
|---|
| ID | 8358925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 3389585 |
|---|
| End bp | 3390961 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644964944 |
|---|
| Product | Ethanolamine ammonia-lyase |
|---|
| Protein accession | YP_003122444 |
|---|
| Protein GI | 256421791 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4303] Ethanolamine ammonia-lyase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.010838 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCATATC AACATACCAT ACAACATAAA CGATATCAGT TTGCCGACCT GCGCACACTG
CTGGCAAAAG CAACGCCTTT CCGCTCAGGA GATGCATTGG CTGGTCTTGC CGCTGATACC
TATGAAGAAA GAGTTGCAGC GCAGATGACG CTGGCAGACA TACCTTTAAA GGCTTTTTTG
CAGGAAGCCA TCATCCCTTA TGAAGAGGAT GAGATCACAC GTTTGATCAT AGACACGCAT
GACCATGCGG CTTTTGCGCC TGTGAGTCAT TTTACAGTAG GAGAGCTGCG GGACTGGCTT
TTAAGCGACG CAGCAGACAC CCGCACGTTG CAACAATTAT CAAAAGGACT GACACCGGAA
ATGGTAGCTG CTGTCTCTAA ACTGATGCGC AACCAGGACC TGATCAGTGT AGCGCAGAAA
TGTGAAGTGG TTACACGCTT CAGGAATACC ATCGGTTTAA AAGGACATCT CTCTGTACGC
CTGCAGCCTA ACCATAATAC GGATGATCCC AAAGGTATAG CGGCGAGTAT CATCGACGGA
CTACTATACG GCAGCGGCGA TGCGGTAATC GGCATCAATC CTGCTACGGA TAGTCCGCAG
ACAGTCATAC AATTGCTACG GATGCTGGAC CAGCTGAGAA TGCAGTTCGA CATTCCCACA
CAATCCTGCA TTCTCTGTCA TGTCACCACT GCCATGCAGA TCATGCACCA GGCGCCGGTA
GATCTGGTAT TTCAGTCTAT TGGTGGGACA GAAAAAACAA ACAGCAGTTT TGGTATTCAC
CTGAATATGC TAAAAGAAGC GCATGAAGCG GCGCTGTCCC TGAAAAGAGG TACGGCAGGC
AATAACGTCA TGTATTTTGA AACAGGACAG GGGAGCGCTT TATCTGCCAA TGCACACGCC
GGTGTAGATC AACAGACCTG TGAAGTAAGG TCGTATGCCG TAGCCCGGCA GTTCTCTCCT
TTGCTGGTAA ATACCGTCGT TGGTTTCATC GGACCGGAAT ATCTTTTCGA TGGTAAACAG
ATCATCCGGG CGGCGCTGGA AGATCATTGC TGTGGTAAGT TAATGGGACT GCCGATGGGT
GTGGATATCT GCTATACCAA TCACGCGGAG GCAGATCAGG ATGATATGGA TAATCTGCTG
ACATTACTCG GTGTAGCAGG TTGTAACTTT ATTATGGGCG TACCGGGTGC AGATGATATC
ATGCTGAATT ATCAGTCTAC TTCTTTTCAC GATGCACTAT ATGCACGGAA AGTATTAGGA
TTAAAAGCAG CGCCGGAATT TGATGCCTGG TTACAGCAAC AAGGCATTAC CGATGCACAG
GGACAATTGC AACAGGTAGG GAAAGCACAT CACTTATTAA GTTATCAGGC AGGATGA
|
|---|
| Protein sequence | MSYQHTIQHK RYQFADLRTL LAKATPFRSG DALAGLAADT YEERVAAQMT LADIPLKAFL
QEAIIPYEED EITRLIIDTH DHAAFAPVSH FTVGELRDWL LSDAADTRTL QQLSKGLTPE
MVAAVSKLMR NQDLISVAQK CEVVTRFRNT IGLKGHLSVR LQPNHNTDDP KGIAASIIDG
LLYGSGDAVI GINPATDSPQ TVIQLLRMLD QLRMQFDIPT QSCILCHVTT AMQIMHQAPV
DLVFQSIGGT EKTNSSFGIH LNMLKEAHEA ALSLKRGTAG NNVMYFETGQ GSALSANAHA
GVDQQTCEVR SYAVARQFSP LLVNTVVGFI GPEYLFDGKQ IIRAALEDHC CGKLMGLPMG
VDICYTNHAE ADQDDMDNLL TLLGVAGCNF IMGVPGADDI MLNYQSTSFH DALYARKVLG
LKAAPEFDAW LQQQGITDAQ GQLQQVGKAH HLLSYQAG
|
|---|
| |