Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2671 |
Symbol | |
ID | 8358831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3264412 |
End bp | 3268020 |
Gene Length | 3609 bp |
Protein Length | 1202 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644964853 |
Product | TonB-dependent receptor plug |
Protein accession | YP_003122354 |
Protein GI | 256421701 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000367152 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATCA TGGGTTATTT CAATCCCGGC GTCCCCCCTA TGCCTACGGG GACCAGATCA ACCAAAAAAG TACTTGTGAT GAAATCAATC ATCCTCTTTT TCTTCATGGT CGTGCTACAT ATCAGTGGCA GTGTATCGGC TCAGACAGTC ACTTTTACCA GTCAGTCAGC GTCATTACAG AAAGTATTTG CCAGCATCCG GCAACAAACG GGCTACAAGT TTTTCTACCG TAACGAAGAT CTGCAGGATT CCAAACCAGT CACAGTACAG TTGAAAGATA TGCCTTTGAT CAGGACATTG CAGATCATCC TGGCCAATCA GCCCCTGACA TATAATATAC AGGGCAAAAC GATTTTCATC AGCCGTAAGG CTTCGTCAAT AGTGGAACCT GCCGCTGTTG AAGCCGTAAA TCATTCTTAT ATTGTCGGCA CCGTCAAAGA CGATCAGGGC CAGCCTCTGC CCAATATTAC TGTTATGTTG CGTAACAGGT ATCGGTACGT TATAACCAAT GAAAAAGGAA TATTTACGTT ATACGGCCTG GTTCCTGATG ATACACTTCA ATTCAGCAGC ATTAATCACG AAAGTGTAGT AGTCCCTTAC TTTCAATTGT CAGAGAATAT GACTGTTATC ATGCGTTCAC GTATTAGTGC ATTATCAGCA GTAACCATTT ACAATACCGG GTATCAGCAG GTGAGCAAGG AAAGGGCTAC CGGGTCATTC GGCAAACCGG ATATGGAAGT ATTCAGAGAA CGTGTCAGCA CCTTTGACGT AGTGGGCCGT CTTGAGGGAC AGATACCTGG CCTTACGGTA GGAACGGGCA GCACTACATC GGGTAGAACG GGTAACGGGT TCTCAACGAG GTCGAGTGTG ATCAGGGGAT ATTCTACTAT CAGCGGCGGA CAACCAACCA ATCCATTGTA TGTGGTAAAT GGCGTGATCA CCACAGATTT CAGTTCTGTG AATCCGGATG ATATTGAAGA TATCACGGTC TTAAAAGATG CTGCAGCAGC AGCTATCTGG GGTGCAAGAG CTGCGAATGG CATTATTGTT ATAAAGACTA AAGAAGGTAA TAAAAATCAA AAACTAAGCG TCAGCTACAC AGGTTCCATC AGTTTTCAGG GCAAGCCGGA CTTTGACTAC AGTCAGCGTA TGAATAGTGC TCAATATATT CAGGCTGCCA GAGAAACATT TGACCCTGTT AATTATCCAT GGAGTTCACT GGCCACACAG GTGGTGCTGC CGCATGAGGT AGTGCTCTAT AATCAGTACC GGGGCCTTAT CAGCGCTGAA CAGGCTAATA AAAGCCTGGA CAGTATGGGG CGCATTGATA ACCAGTCACA GATAAAAAAC CTGTTCTATC GCAATCCGGT AACGACCAAT CATACGGTGT CTGTGTCGGC TGGCAATAAT GTGTATGCAC TCTATGCTTC ACTGGGCTGG ACAGGTGTAC AGGATAACGT TCCCGGTAAT AAGAACAACA CCTATAAAGT CAATCTTAGC CAAAGCTTCA ATGCAGGAAA ACGGATCAGC GTTACATTAA ACACCTCCCT GATCAACAGC GTTTCGAGCA GAAAGAATGT GCCATCCGTG GATAATTCTT TTGTGCCATA CCAGTTATTT GTTGACGAAC ACGGCCAGCA GCAGAACCTT GCGTTTACAA ACGGCTGGTC GGATTCTACC CGCAATAACT ACTCAAGAAG AAGCAGGGTG AACCTGGATT ATTATCCCTT ACAGGAAATT AACTATGCTC ATTCCAATAC CAATACGATC AGTATCAACA TGACAGCTAA TGTTGGTATC AGATTGTGGA AAGGACTTAG TTTCCAGGGG ACTTACGGCT ACCTGAAAGC GCCAGGCACC CTGAGCACAT TCACAGACAG TCGCGCCATT GGCCAACGTA AACAGTTGTT ATCATTCACA GTGGCACCTA CAGCGGCATC TGCGCCGGTG TATTACCTGC CGGAGAATAA CAGCTTATAT ATTTCCAACA ATAATGACCA GCGCAACTGG ACGGTGCGTA ACCAGCTGAT ATATACCACC ACCCCCAGAG CAGGAAAGGA TGCGCTGACC TTACAGGCAG GTCAGGAGGC ACAGGAAGCA AGTGCATCAC GGACCACAAC AAACGTGGTT GGCTATGATG AAGCCCTTGG CACCTACCCG TTAATTGACT ATGCCCGTTT ACGGCAGGGC GTATTTGGCA CTGTAACAGG CTTTGGCTTT TTCAGTACGC AGCCTTACCA GATATTCAGT CAGCTGACCC GTTTTACTTC CTGGTTTGCA TTGGGCAGTT ATACTTTTGA TCATAAATAT AGTCTGGATG TCAGCTGGCG CCAGGATCAC AGTAATCAGT TTGGCAGCGA TATATCTGTA CAGAATAAAC CGGTTTGGAG TGCAGGCGGT AAATGGCAGT TACGTAACGA AAGCTTCATG CAACAGGTGA AATGGGTCGA TGCGCTGGCA TTAAGAGCGA CCTACGGCAT CACCGGCAAC TCTCCTTATG TGGGTGCGGC TTCATTGTAT GATATATTAA ATGCGCAACC ACAGTCGCAG ACCGGTGGCG TAGCCGGAGA TGCACTGACA CTGAACCAGC CGGCTAACAG AAAGCTGGCG TGGGAAAGAA CCCGGACCAT CAATGCAGGA ATAGACTTTT CCGTACTGCG TAGCCGTATC TCCGGTGCGA TCGATATGTA CAGTAAAACT ACTACGGACC TGCTGGGAAG TGTGCCTTTA AATCCATTTA CCGGCTTTAG CAGCCAGACT GGAAATGTAG GTAAACTAGT CAACAAAGGG ATCGAATTCT CCCTGCGCAC GGTAAACATC AGGAAACAGG ACTGGAGCTG GTCCAGCAGC CTGGTATTCA GTTATAATTA TAACAAACTC GTGTCTTACG CGACATTGAA TCCTTCACTC AATACGGCTA GCTACAAAAT ATTTGCGCCC TTTTGGATAG GATACAATTC CAAGCCCTTA TTTGGCTATC AGTTCGCAGG ACTGGACAAT GTAGGAGATC CGCAGATCAG GCTGGCAGAT AAAACAGTGA CGAAAGCTCC TAACGTTACA AAACCGGAAG ACATCATATA TATGGGTACT ACTCAACCGC CGGTCAATGG AGGATTTACC AACCGTTTCC AGTATAAGGG GCTTTCGCTT ACAGTGAATA TGATTTTTAA TACAGGCGCC GTCATGCGCA GGAACGTCAA TATCTTCTAT AGCGGCAGAA TGCCTACTTC TACATCGCTG GGAGGCAATA ATCTGTATAC ATCATTCCAG GACCGCTGGA AACAACCGGG AGATGAATTA AAAACTGATA TTCCCGCATA TGTTTCCAAC CCAGGTATCA GCTATTCACG CAGGGATATC AACTACTATG CTTATGGCGA CAACAACGTC ATAAGCGCAT CCTATATCAA AGTACGGGAT CTGACCCTGG CTTATGAACT ACAGGCAGCT GCGCTGCGCT TCCTGAAACT ACAAAGACTA AACATTTATG CACAGACCAC CAATTTCCTG ATCTGGACGG CCAATGATGA GCGGATAGAT CCGGAAACAG GTTTCCCGGG CGCACTGTAT AAACACCAAT ACAACCTGGG GATAAATGTT ACACTTTAA
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Protein sequence | MQIMGYFNPG VPPMPTGTRS TKKVLVMKSI ILFFFMVVLH ISGSVSAQTV TFTSQSASLQ KVFASIRQQT GYKFFYRNED LQDSKPVTVQ LKDMPLIRTL QIILANQPLT YNIQGKTIFI SRKASSIVEP AAVEAVNHSY IVGTVKDDQG QPLPNITVML RNRYRYVITN EKGIFTLYGL VPDDTLQFSS INHESVVVPY FQLSENMTVI MRSRISALSA VTIYNTGYQQ VSKERATGSF GKPDMEVFRE RVSTFDVVGR LEGQIPGLTV GTGSTTSGRT GNGFSTRSSV IRGYSTISGG QPTNPLYVVN GVITTDFSSV NPDDIEDITV LKDAAAAAIW GARAANGIIV IKTKEGNKNQ KLSVSYTGSI SFQGKPDFDY SQRMNSAQYI QAARETFDPV NYPWSSLATQ VVLPHEVVLY NQYRGLISAE QANKSLDSMG RIDNQSQIKN LFYRNPVTTN HTVSVSAGNN VYALYASLGW TGVQDNVPGN KNNTYKVNLS QSFNAGKRIS VTLNTSLINS VSSRKNVPSV DNSFVPYQLF VDEHGQQQNL AFTNGWSDST RNNYSRRSRV NLDYYPLQEI NYAHSNTNTI SINMTANVGI RLWKGLSFQG TYGYLKAPGT LSTFTDSRAI GQRKQLLSFT VAPTAASAPV YYLPENNSLY ISNNNDQRNW TVRNQLIYTT TPRAGKDALT LQAGQEAQEA SASRTTTNVV GYDEALGTYP LIDYARLRQG VFGTVTGFGF FSTQPYQIFS QLTRFTSWFA LGSYTFDHKY SLDVSWRQDH SNQFGSDISV QNKPVWSAGG KWQLRNESFM QQVKWVDALA LRATYGITGN SPYVGAASLY DILNAQPQSQ TGGVAGDALT LNQPANRKLA WERTRTINAG IDFSVLRSRI SGAIDMYSKT TTDLLGSVPL NPFTGFSSQT GNVGKLVNKG IEFSLRTVNI RKQDWSWSSS LVFSYNYNKL VSYATLNPSL NTASYKIFAP FWIGYNSKPL FGYQFAGLDN VGDPQIRLAD KTVTKAPNVT KPEDIIYMGT TQPPVNGGFT NRFQYKGLSL TVNMIFNTGA VMRRNVNIFY SGRMPTSTSL GGNNLYTSFQ DRWKQPGDEL KTDIPAYVSN PGISYSRRDI NYYAYGDNNV ISASYIKVRD LTLAYELQAA ALRFLKLQRL NIYAQTTNFL IWTANDERID PETGFPGALY KHQYNLGINV TL
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