| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2661 |
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| Symbol | |
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| ID | 8358821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3249097 |
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| End bp | 3249855 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644964843 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003122344 |
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| Protein GI | 256421691 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTAA TCATAATTGA AGACGAACGG AGAACAGCGA TTGAGTTAAA GTCTATGCTG
GAAAACATCG ATCCCGAGAT CAATGTCATG GCTATCTTAC CCTCTGTGGC GACTGCTGTT
ACGTGGTTTC GTGAAAACCC GACGCCGGAT CTTATATTCT CGGATATACA GCTGGGAGAC
GGACTGAGCT TTGATATCTT TAAAGAAGTA CAGATCAACG TACCGGTGAT ATTCTCCACT
GCATTCGACC AGTACGCTAT TAATGCCTTT GAATCCAACA GTATTGATTA CTTACTCAAG
CCCATTGAGG AGAGTATGCT GGAACGCAGT TTACAGAAAT ATAACCGTAT CCGGGAACAC
TTCTCTGCGG GTGCATATGC TACCAATCTG AGTAGGGCGG TGAATCAGCT GGACAACAAC
TACAAACAGT CCATTCTGAT CTACTACAGG GAAAAGATCG TTCCTGTTAA GGTCGGCAGT
ATTTCCTTCG TATATACGTC TAACGGGATT GTCAGGATAT ATACCACGGA AGGACCGGAA
TATACCGTTC CCTATACCAT CGAACAGCTC GAAGAAATGC TGAATCCACA GGTCTTTTTT
AAGGCTAACA GGCAGTTCAT TATCAGCAGA AATATCGTCC TGGATATCGA GCATTATTTC
AACCGCAGAC TTATCGTGAA AACTACCTGC CAGACGCCGG ATAAGATTAT TATCAGCAGG
CTCAAAGCCC AGGATTTCCT CCGTTGGGTA GAACAGTAA
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| Protein sequence | MNVIIIEDER RTAIELKSML ENIDPEINVM AILPSVATAV TWFRENPTPD LIFSDIQLGD
GLSFDIFKEV QINVPVIFST AFDQYAINAF ESNSIDYLLK PIEESMLERS LQKYNRIREH
FSAGAYATNL SRAVNQLDNN YKQSILIYYR EKIVPVKVGS ISFVYTSNGI VRIYTTEGPE
YTVPYTIEQL EEMLNPQVFF KANRQFIISR NIVLDIEHYF NRRLIVKTTC QTPDKIIISR
LKAQDFLRWV EQ
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