Gene Cpin_2647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2647 
Symbol 
ID8358807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3238528 
End bp3238878 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content41% 
IMG OID644964829 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003122330 
Protein GI256421677 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0854787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TATCCAGGCA GCAGATAGAT CTTCAGGTTG ACCTGAAATA TCTTGAAGAC 
ACCTTGTTTG TAATCAGCGG AAAATGGACA ATGAAAATAA TATCAGCGCT TAGCTGCGGG
AATAAAAGAT TCAGGGAGAT CGGGAAAGCG ATCCCCGATA TCACTTTCAG AATGCTGTCG
AAAGAACTGC AACAACTGGA AGCCAACAAA CTGATCTCAA GAACGGTTAC TACGGAGGGA
AGAATGCTTA TTCATTACGA GATCACTGAA TATGCCAAAA CGCTTATACC TGTCATTTCT
GAAATGATTA AATGGGGAAA AGATCATAGG AGGGCGTATC GAAGCGTATG A
 
Protein sequence
MKKVSRQQID LQVDLKYLED TLFVISGKWT MKIISALSCG NKRFREIGKA IPDITFRMLS 
KELQQLEANK LISRTVTTEG RMLIHYEITE YAKTLIPVIS EMIKWGKDHR RAYRSV