Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2647 |
Symbol | |
ID | 8358807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 3238528 |
End bp | 3238878 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644964829 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003122330 |
Protein GI | 256421677 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0854787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAG TATCCAGGCA GCAGATAGAT CTTCAGGTTG ACCTGAAATA TCTTGAAGAC ACCTTGTTTG TAATCAGCGG AAAATGGACA ATGAAAATAA TATCAGCGCT TAGCTGCGGG AATAAAAGAT TCAGGGAGAT CGGGAAAGCG ATCCCCGATA TCACTTTCAG AATGCTGTCG AAAGAACTGC AACAACTGGA AGCCAACAAA CTGATCTCAA GAACGGTTAC TACGGAGGGA AGAATGCTTA TTCATTACGA GATCACTGAA TATGCCAAAA CGCTTATACC TGTCATTTCT GAAATGATTA AATGGGGAAA AGATCATAGG AGGGCGTATC GAAGCGTATG A
|
Protein sequence | MKKVSRQQID LQVDLKYLED TLFVISGKWT MKIISALSCG NKRFREIGKA IPDITFRMLS KELQQLEANK LISRTVTTEG RMLIHYEITE YAKTLIPVIS EMIKWGKDHR RAYRSV
|
| |