Gene Cpin_2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2542 
Symbol 
ID8358701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3112791 
End bp3114134 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content45% 
IMG OID644964725 
Productserine/threonine protein kinase 
Protein accessionYP_003122227 
Protein GI256421574 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAT ATCCAAGCCT GGAAAAGGCA TTCGAGCTGC CATTAAAGGA AAATGATAAA 
CTGTTGAAAG CATCCGGAGT GAAATTCATA GACGATCATA TCTGGCTGAG ATCTGGTGAA
TTTAGGGCTA CACATGGCTG GCTGATTTAT TTGTCGGTGA GAACAGCAAG TCTGCAAGCC
CTGCTCAATG ACATACTTCC AATACTGAAG GACGGTAATA CACCTTTCAG AATCATCAGG
AACGAGCATG AGGCCTACAG GCTGCATGCA GGCTTGTATG GGCCGCATCT GATCGGAAAG
GGAATCCAGT TTCATGCCCG GACAGAAGGC GAGGGCCGGC ATTTGATAGA TAGGTTGTTA
CCTCTCACAG GGACATATGC GGGATGTATT ATTCAGGATT GTATACGGAT CTCAAATATC
ATTTATGCAC AGGAGGTCAG TAACAGGATA CCGCAACCAA CAAAAGCCCC CTTCCCATTT
ACAGTGGAGA AAAAATACCG GAAGCCTGCG TCCAGGAAAT TCGTCGGTCT TTTTTACCTA
CCGGTGGAAG AGCTGAACTA TAGCCCCAAA AGCACTATCT ACAAAGGTTT TAATTTTAAA
CGCCCCTTTA AATGGTGCTT GATCAAACAG GGCAACAGCC ATACAGGTGA TGATCATTTT
GGCAGGGATA TCCGGGATAA GTTACGCTGG CAGAAGAAGG TGATTAAAGC CCTGGAAGCA
CATGTAAGGA CCCCAAAATT CATAGATCTT GCCGAATATG AGGCATTCTC CTTTCTCGTC
CTGGAATATG TAGACGGGGT GCATGCAGGG CAATGGTTGG AACAGATCAG GCAGGGAAAA
ACCTGGAAGG ACCTTGGGAC TGATACAAAG AAGATCATAC TGGAAGTCTA CCTATCTATA
TTATCACTTG TAAAGCACAT GCATGATGCC GGTTATGTAC ATCGTGATAT CAATGAAAGG
AATTTTATCA TTGACGGCGG GCGCAGAACC TACATCATTG ATTTTGAAAT GGCCTGTTGC
CTGCACGACG GACTTCCTGA TCCTCCTTTC ACATTAGGTA CAATTGGGTA TATGTCGCCG
GAGCAAATGA GCTATATGAA ACCCCATTTC GGTGACGATG TGTATTCACT CGGCGCCCTG
CTTGCCTATT TCCTGACAGG AGAGTTACCT GAGCGGATCT TTTTCGGCGA AATGTATACA
GTGAGGGGAA AACTGCAGGA GTATGCAGTG GAGTCCCGCC TGGCAGATCT GATCATAAAA
ATGACCGATA CTAACTATTT AGAAAGAGCC ACGATGAACA TGGCTATAAA CCAGGTGGAA
GACCTGATCA CCTTTTACTT ATAA
 
Protein sequence
MLQYPSLEKA FELPLKENDK LLKASGVKFI DDHIWLRSGE FRATHGWLIY LSVRTASLQA 
LLNDILPILK DGNTPFRIIR NEHEAYRLHA GLYGPHLIGK GIQFHARTEG EGRHLIDRLL
PLTGTYAGCI IQDCIRISNI IYAQEVSNRI PQPTKAPFPF TVEKKYRKPA SRKFVGLFYL
PVEELNYSPK STIYKGFNFK RPFKWCLIKQ GNSHTGDDHF GRDIRDKLRW QKKVIKALEA
HVRTPKFIDL AEYEAFSFLV LEYVDGVHAG QWLEQIRQGK TWKDLGTDTK KIILEVYLSI
LSLVKHMHDA GYVHRDINER NFIIDGGRRT YIIDFEMACC LHDGLPDPPF TLGTIGYMSP
EQMSYMKPHF GDDVYSLGAL LAYFLTGELP ERIFFGEMYT VRGKLQEYAV ESRLADLIIK
MTDTNYLERA TMNMAINQVE DLITFYL