Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2528 |
Symbol | |
ID | 8358687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3103167 |
End bp | 3104084 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964711 |
Product | dienelactone hydrolase domain protein |
Protein accession | YP_003122213 |
Protein GI | 256421560 |
COG category | [R] General function prediction only |
COG ID | [COG1073] Hydrolases of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0524869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACAAT CAGTAAAATT CTCAAACAGG GCCTGGGAAG TTGCGGCAGA TCTTTATCTG CCGGACAACC TTGATAAAAC CAAAAAGCAT ACAGCAATTA TTTGTGTTCA TCCGGGTAGC AGCGTAAAAG AACAGACGGC AGGTCTCTAC GCGGCTAAAC TATCGAAGGA GGGATTTATA GCAATCGCCT TTGATGCTTC TTTTCAGGGG GAAAGCGGCG GTATGCCCCG TTACCTGGAA GATCCTGTGA CCCGTGTGGA AGACATCCGT TGTGCGGTGG ACTATCTGAC TACTGTAGAC TTTGTAGGTA GTGAACGTAT CGGTGTACTA GGGATTTGTG CGGGTGGTGG TTACGCGGCA AATGCAGCCC TTACGGAAAG ACGTATCAAA GCGGTTGTGT CTGTTTCTCC TACGAATATC GGTCGCGCTT ACAGAGAAAA CAGTACAATA GCAACACTGG AAGCAGTCGG CCGACAACGT ACGGCAGAAG CAAACGGAGC AGCTGCCTTG ATTACACCGT GGACGCCGGC GTCTGCAGCA GCTGCAAGGC AGGCTGGGTT GACAGATGCG GATCTGCTGG AGGCAATAGA TTATTATAGA ACCTCCAGGG GAGAACATCC GAATGCCAAC AATCAGCTGC GCTTTACCAG TATCAGTTCC ATCATGGCAT TTGATGCTTT CCATCTGGCA GAATATTTAT TAACGCAGCC TTTACTGGTG ATAGTGGGAG ATAGGGTCGG TTCATTCGGC GCTTACAGAG ATGGCTTTGA GCTGTATAAT AAAGCTGCGT CAAAAGATAA AAGCATTCAT ACCGTAAAAG GAGCTGGCCA TTACGATCTT TATGATCAAC CGGCAGCGAC AACGGAAGCA GTTGGGAAAA TTGTTCCCTT TCTGCAGAAA GCTCTTTCGG CGGAATAG
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Protein sequence | MQQSVKFSNR AWEVAADLYL PDNLDKTKKH TAIICVHPGS SVKEQTAGLY AAKLSKEGFI AIAFDASFQG ESGGMPRYLE DPVTRVEDIR CAVDYLTTVD FVGSERIGVL GICAGGGYAA NAALTERRIK AVVSVSPTNI GRAYRENSTI ATLEAVGRQR TAEANGAAAL ITPWTPASAA AARQAGLTDA DLLEAIDYYR TSRGEHPNAN NQLRFTSISS IMAFDAFHLA EYLLTQPLLV IVGDRVGSFG AYRDGFELYN KAASKDKSIH TVKGAGHYDL YDQPAATTEA VGKIVPFLQK ALSAE
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