Gene Cpin_2507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2507 
Symbol 
ID8358665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3083086 
End bp3084372 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content39% 
IMG OID644964693 
Producthypothetical protein 
Protein accessionYP_003122196 
Protein GI256421543 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAAA CTGCTTTAGC TTTTTCTCTT TATTTAATAG GTTCAATTTT TAACCCGGCT 
TTTGGCCAGG AGCGGCAATC TCCTGCACAA TTGCAAAACC TGGCTGATAG CTTATATAAA
GCAAAGCAAT TTTCGCTTGC GGCAAGTTAT TACCTGGCAG TAGTTGATAA GAGTGACTTT
AAGGCAAAAA AAATGAGTGC CTATTATAAT ATGGCTTGTT GTCTTAGTCT TGCCGGAAAA
TCAGATTCAG CATTGATTAT TTTGAAAGAG GCAATAAAAG CCGGTTATGA TGACAAAGCT
CATTTACAAA AGGATGAAGA CCTGATTTCC TTACACACTT CATCTAGATG GAATGGTCTC
ATAAATAGTG TGCAGGAAAG CAAAAAGGTA TTAAATACTG ATCCTGCCAA AGCGAGTTTC
ATTACTACTG ATATTCATCA TTTCTGGAAA GCCTTTGATA TCGCATCGAG GGACACTGCA
CATTTCAGGC AGATTATAAA GGAGGGATAT TTTGATAAGG CCAGTAGAGG AATGAATGAT
TACATGGGCT ATAAAGTGAG CAGTATTGAC TTTTTCGTTG ATCATATCCG CTCTGCACCT
GCGTTCTACG CAGCCATTCG TAAGAGTACA TTTAAGACAG ATGAGTATAA GCCGGCCTTT
CTGGCTTCCT ATGTTAAACT AAAGTCCATA TATGAGGATG CGCTGTTTCC TGATGTATAT
TTTGTAATAG GTGCGCTTAC CAGTGGTGGA ACGGTATCTG ACGCCGGATT ACTGCTGGGG
GTGAATCAAA CGGCCAAGGA CAGTACAGTA CCACTTAATG AGCTTAGTTT CAAACAAAGA
ACCAGGGTAA ATAACATTTT GCTGTTACCA TATCTGGTTG CTCATGAACT TATCCATTTC
CAGCAGGATG GTATGAAAAA TGACACTACC ACCCTAAGCT ATGTAATCCG GGAGGGAATG
GCTGATTTTA TTGGTGAATT AATCAGTGGA GGAAATGCCA ACCAGGTGCT TTATAACTGG
GCAAAAGGTA AGGAGAAACA AATATGGAGC AATTTTACGA AGGATATGTA CTATAACAGG
TACAGTAACT GGATAGCTAA TTCTCAACAA TCTACCCCAG ATAATTTACC GGACCAGGGA
TATTGGATAG GTTATCAGAT CTGTAAATCT TATTATGAGC AGTCTATAGA TAAAAAGAAG
GCTATTTACG ACATGCTGCA TATACAGGAT TACGATGCAT TTTTCCAACA GAGTAAATGG
GCGGATAAAA TCTCCACTTT ACAGTAA
 
Protein sequence
MYKTALAFSL YLIGSIFNPA FGQERQSPAQ LQNLADSLYK AKQFSLAASY YLAVVDKSDF 
KAKKMSAYYN MACCLSLAGK SDSALIILKE AIKAGYDDKA HLQKDEDLIS LHTSSRWNGL
INSVQESKKV LNTDPAKASF ITTDIHHFWK AFDIASRDTA HFRQIIKEGY FDKASRGMND
YMGYKVSSID FFVDHIRSAP AFYAAIRKST FKTDEYKPAF LASYVKLKSI YEDALFPDVY
FVIGALTSGG TVSDAGLLLG VNQTAKDSTV PLNELSFKQR TRVNNILLLP YLVAHELIHF
QQDGMKNDTT TLSYVIREGM ADFIGELISG GNANQVLYNW AKGKEKQIWS NFTKDMYYNR
YSNWIANSQQ STPDNLPDQG YWIGYQICKS YYEQSIDKKK AIYDMLHIQD YDAFFQQSKW
ADKISTLQ