Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2422 |
Symbol | |
ID | 8358577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2979867 |
End bp | 2981723 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644964608 |
Product | mannose-6-phosphate isomerase-like protein |
Protein accession | YP_003122114 |
Protein GI | 256421461 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1482] Phosphomannose isomerase |
TIGRFAM ID | [TIGR00218] mannose-6-phosphate isomerase, class I |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.167496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAACG CCGAAAAATA TATTACTACG CAGCCTGGAT CTGCAATCAA TACAGAAGGC TGGCGTAATT CCGGTCAGCC CCTGCTGCCC TTACAGCAAT CCTCCTTACC GGAAGGTTAT AACATCTATC CGGCACATGC ACTGGGTAAT GGAAAAATAA AAGAAGGGTA TGAAACATTG GCTACCTGGA TCGCCGGTCA TTCCCAGGTA TTGATAGATG GCTATACCGG TGTGTTCTGG GAGGACATCC AGGCAGCATT GGAAGCCATA TTCGCAGTAA AAAAAATACG CGTAAAGTGG CATTATACTG CCGCTGCGAT CAAAGATACA GTTACTGTAG ATCAACTGGT GGCGCCATTC ACCGGAGAAC ATGGCGCTGT GTGGGGTACG CGTACAACCT TACGGCTGAC TGACTTCTTT GACAAACAAA AGCTTGCAGC CATACAACCT GATCCTGCTT ATGATGTGAA TATCGTTATA GGTATCGGTG CATCACTGAC AGCATGGAAG GCGCCATTGA TCTATATGGA TATGCCGAAG AATGAACTGC AATACCGTAT GCGTGCAGGT GCGGCCGGTA ACCTGGCTAC ACACACGATG GATAAGTCAT CCGAAATGTA TAAACGCGCC TATTTCGTTG ACTGGGTAGT CCTGAATGCA CATAAAGCAG CTATCGCAGA TGATATCACT GTATTTGCCG ATTCACAGTG GGGACAAACC CTTACCTGGA TAAAAGCAGC AGACCTGATA GCAGGTATAC GGCATATCAG TCAGGATACC TTCCGCGTAC GTCCCTGGTT TGAAGCGGGC GCCTGGGGCG GACAGTGGAT GAAAAAACAT ATTGCGGGTC TGCCGCAGCA GGAAGTCAAC CTGGCCTGGT CTTTTGAAAT GATTGTACCC GAGAATGGTG TATTATTCGA AAGTGATCAT TATCTTTTCG AAATTCCTTT CGAATGGCTG ATGTTCCTGC AACATAAAGC TATTTTGGGC AAACATGCAG GGATCTTCGG TTATGAATTC CCGATACGCT TCGATTTCCT GGATACATTT GATGGTGGCA ACCTGTCTAT CCAATGTCAT CCTTCCATGG AATACATCCG TGAGCAGTTT GGCGAGACGT TTACACAGGA CGAAACCTAC TATATTTTAG ATTGTAAAGC AGGCGCCGGT GTGTATCTTG GTTTTACGGA GCAGATAGAC CCGGAACAGT TTAAAGCTAT ATTGGAATAT AGTCAGCAGC ATAATCAGCC GGTAGAGATC ACGGATTATG TGCAGCGTCA TGAGGCGAAA AAGCACGACC TGTTCCTGAT ACCGAATGGT ACGGTGCATA GTGCAGGTGC AGATAACCTG GTACTGGAAA TCAGTGCCAC GCCATACATC TTTACTTTCA AGATGTACGA CTGGCTGAGG CTCGGACTGG ATGGTCAGCC AAGACCGATC AATATTGATC ATGCATTCAG GAACCTGGTA TTCAGCAGGA AAGGAGCACG TGTACAGCAG GAACTGATAT CGGCGCCGGC AGTGATACAA AAGGGTGCTG ACTGGCAGTT ATGGCATCTG CCTACCCATG AGCAGCATTT TTATGATGTA GAGCGGGTAG AACTGGAAAC CAGCGTATCT TTTGATACCA CAGGACGTTG TCTGATCCTG ATGCTGGTAG AAGGTACTAC GATAGCGGTG AAGACAGCCA ATGGCAAAGA AACATTGTAC CAGTATGCGG AAACATTTGT GATACCCGCT GCTGCTGATT ATTATACACT CATTAACAAA AGTCCGGGAA CAGCAAAAGT GGTGCAGGCA TTTCTGAAAG AGGACCATCC CGTATTCAGC ATTATCAGTT ATGAAAAAAC AATCTAG
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Protein sequence | MLNAEKYITT QPGSAINTEG WRNSGQPLLP LQQSSLPEGY NIYPAHALGN GKIKEGYETL ATWIAGHSQV LIDGYTGVFW EDIQAALEAI FAVKKIRVKW HYTAAAIKDT VTVDQLVAPF TGEHGAVWGT RTTLRLTDFF DKQKLAAIQP DPAYDVNIVI GIGASLTAWK APLIYMDMPK NELQYRMRAG AAGNLATHTM DKSSEMYKRA YFVDWVVLNA HKAAIADDIT VFADSQWGQT LTWIKAADLI AGIRHISQDT FRVRPWFEAG AWGGQWMKKH IAGLPQQEVN LAWSFEMIVP ENGVLFESDH YLFEIPFEWL MFLQHKAILG KHAGIFGYEF PIRFDFLDTF DGGNLSIQCH PSMEYIREQF GETFTQDETY YILDCKAGAG VYLGFTEQID PEQFKAILEY SQQHNQPVEI TDYVQRHEAK KHDLFLIPNG TVHSAGADNL VLEISATPYI FTFKMYDWLR LGLDGQPRPI NIDHAFRNLV FSRKGARVQQ ELISAPAVIQ KGADWQLWHL PTHEQHFYDV ERVELETSVS FDTTGRCLIL MLVEGTTIAV KTANGKETLY QYAETFVIPA AADYYTLINK SPGTAKVVQA FLKEDHPVFS IISYEKTI
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