5 homologs were found in PanDaTox collection
for query gene Cpin_2419 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_2419  RNA ligase, DRB0094 family  100 
 
 
335 aa  686    Chitinophaga pinensis DSM 2588  Bacteria  normal  0.563952  normal  0.35844 
 
 
-
 
NC_014148  Plim_0508  RNA ligase, DRB0094 family  42.05 
 
 
366 aa  266  5e-70  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.23085  n/a   
 
 
-
 
NC_013517  Sterm_2898  RNA ligase, DRB0094 family  42.11 
 
 
336 aa  256  4e-67  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_5513  RNA ligase, DRB0094 family  31.56 
 
 
360 aa  101  2e-20  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00942414  normal  0.0440545 
 
 
-
 
NC_011879  Achl_4341  hypothetical protein  33.62 
 
 
225 aa  96.3  7e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.560027 
 
 
-
 
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