| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2419 |
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| Symbol | |
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| ID | 8358574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2974886 |
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| End bp | 2975893 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644964605 |
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| Product | RNA ligase, DRB0094 family |
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| Protein accession | YP_003122111 |
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| Protein GI | 256421458 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02306] RNA ligase, DRB0094 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.563952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.35844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGGA AATTAGTGTC CCCGGTTGTC ATTGACGACG TACAACCAAT TGAGGGTGCG
GACCTTATTG AAGTAGCCAC CGTTAAGGGG TGGAAACTCG TTATTAAAAA AGGAGAATTC
GTAACAGGCG ATCACGCCGT CTATTGCGAA ATTGATTCTT TCCTGCCGGT AAAGGAGGAA
TTCGAATTCC TGAGAAAAAG CTCATTCCGT AGAATGGGAG AGCAGGAGGG CTTCAGGCTC
AAAACAATGA GGATGAGAGG ACAGATCTCT CAGGGGCTCT TATTGCCTAT CAGACTGCTG
GATGGCTACA CTTACCAGTT AGGTGAGGAT GTATCCGCAC ACCTGGGCGT GGTGAAATAC
GAACCTCCTA TGCCTGCTGC ATTAGGTGGT ATCGCCAAAG GAAACTTCCC TTCCTTTATC
CCTAAAACGG ATGAAGAAAG AATCCAGAAC CTCAGCAAAG AGTTTGAATC ATACAAACAA
CATACATTTT ATGTAACGGA AAAACTGGAC GGTTCTTCTG TGACATACTA CATGAACGAA
GGTTTGTTTG GCGTATGTTC CCGTAACCTG GACCTTGAAG CATCTGAAGA TAACAGTTTC
TGGAAGGTGG CTGAAAAGGA GAATATTGCT GCTAAACTGG CTGCCCTTGG TAAGAATATC
GCAATACAGG GTGAGCTGAT CGGTGAAGGT ATACAGGGCA ATGCATACGG TTTCCGCGGA
CAAACAGCAC GGTTTTTCAA TGCGTTTGAT ATTGATGCTT ACAGGTACCT CGGACTGGAA
GAATTCACTG CGCTGATAGC ATCGCTTGAC TTGCAGACAG TACCTATCCT GGACCTGAAT
TATACCTTAC CTGCTACATT GGATGAAATG CTGACCATCG CAGATGGCGC TTCCGTATTG
AGTCCGCAGG GTAAGTCTGT AGAAAGGGAA GGACTGGTAA TCAGATCCAC CGACAGAAAG
ATTTCATTCA AGGTGATTTC AAATAAATTC CTTTTGAACG AAAGATAA
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| Protein sequence | MERKLVSPVV IDDVQPIEGA DLIEVATVKG WKLVIKKGEF VTGDHAVYCE IDSFLPVKEE
FEFLRKSSFR RMGEQEGFRL KTMRMRGQIS QGLLLPIRLL DGYTYQLGED VSAHLGVVKY
EPPMPAALGG IAKGNFPSFI PKTDEERIQN LSKEFESYKQ HTFYVTEKLD GSSVTYYMNE
GLFGVCSRNL DLEASEDNSF WKVAEKENIA AKLAALGKNI AIQGELIGEG IQGNAYGFRG
QTARFFNAFD IDAYRYLGLE EFTALIASLD LQTVPILDLN YTLPATLDEM LTIADGASVL
SPQGKSVERE GLVIRSTDRK ISFKVISNKF LLNER
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