Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2403 |
Symbol | |
ID | 8358558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2956798 |
End bp | 2959344 |
Gene Length | 2547 bp |
Protein Length | 848 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644964589 |
Product | hypothetical protein |
Protein accession | YP_003122095 |
Protein GI | 256421442 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.931107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.265597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGGTA GTAAAAATAT TAGTTTAGGT CTTTTGTTAT TGCTTACGCT CGGCTTTAGT TCAGTATTTG CACAAACAAC GACAGTTAAG GGGCTTGTTA CCGATAAATC GGGCTCCCCT TTGCCATTTG TAAGCGTTTT TGTGCCTGGT ACATCCTTCG GTATCTCAAC AGATGCCGCA GGCCGGTACG AATTACAGTT TGATAGCCCA AAAGATAGTG TGCGCTTTTC CCTCATGGGG TATAAAGCGG TGACAATACG CATACAAAAA GGACAGGAGC AGGTACGGAA CATGATACTC GACAACGGAG CTAAACAGCT CACCGAGTTT GTCGTGAAGC GTAAGAAAGA GCGATACAGA AACAAAGACA ATCCGGCTGT AGAGTTGATC CGACTGGTCA TTGATAATAA ATCAAAGAAC AGAATGGAAC ACTACGACTA TGCGAATTAT AACCAGTACG AAAAGCTGGA ATTTGCATTG AGTAATCTCT CCGAAAAGAT ACAGAACAGC CGCTTTACCC GCAAATACAA ATTTGTGTTC GAAAACCAGG ATACGACCAA AATGGCCGGC CGCTCGCTGC TGCCCATGTA CCTGGAAGAA AAACTCGCAG ATGTCTATTT CCGGAAGGAT CCAGAGAAAA AGAAAACAAT CATCACTGCT GATAAGAAAG TCAGCTTTGA GAATTATATT GACAACCGTG GTCTGAGTGC TTATCTGAAC CACATCTACC AGGATGTGGA TATCTATGAT AACAACATGA TGCTGTTCAC CAACCAGTTC CTCAGCCCGA TCGCCAACGC AGGTCCCACC TTTTACAGAT ATTATATCGC TGATACGATC GTGACGGCAG ACAGCTCCAA ACTGATCGTA CTGGAATTCT ATCCGCGTAA TAAAACGGAC AGGTTACTGG AAGGTAAACT GTATATCACG CTCGATGGCA ACTACGCCAT CCAGAAAGCG GATATGACGG CGAATAAAGA GATCAACCTG AACTTTATCC GTGATTTCCA CCTGTATATG GACTTTGAGA AGACTCCGGA CGGGCGTTAT TTCATGAATA AAAATACCCT GATGGCGGAT TTCGGTCTGT TTAAGGGAAG CAGCGGCCTC TATGGGGAAC GTACCGTTTC CATCAAAAAC ATGGTAATCA ATAAGCCGAT GCCGGATGGC TTCTATGCAG GAACAGCCGT CGTGCAGAAT GAAGACCAGG TGCAGAAACC GGATAGCTTC TGGATCGCGA ACAGGCATGA TAGTCTGACG ACCGCAGAAT CCAAGGTATA TCAGAATATT GATAGTCTGC AGAACATGAA ATCCTTCAAA CGGACCCTGG ATATCGCCAC CTTCCTGCTG GCAGGATGGA AGAGCGCAGG GCCCAAATTT GAAATAGGTC CGGTAAATAC CTTCTATAAC TTCAACCCGG TAGAAGGTTT TCGTCTGAGA CTGGGTGGTA GAACGACGCC TAAATTCAAT AAGAGTCTCT ACCTGGAGGG CTACACCGCC TACGGTTTCA AGGATGAAAA GTGGAAATAT TACTTCGGAG GTTCTTATGC CTTCAACCAT AAGTCTATTT ACGACTGGCC GGTACGCGCC CTCAAGGCAA GTTACCAGCA CGATACCAAG ATTCCGGGTC AGGAACTGCA GTTCGTACAG GAAGATAACT TCCTGTTGTC CTTCAAACGT GGTAATAACG ATAAATGGCT GTACAACGAC ATTTACAGGT TGTTTTACCT CCACGAATTT GACAACCACT CATCCTTCCA GCTTGGATTC AAACACTGGG GACAGACGCC GGCAGGTACC CTGTCTTATT ATAAAGGGCT TACCCAGTCA GACAGCGTAA AGAAGATCAC CACAGCAGAA CTGTCACTCG AACTGCGCTG GGCGCCGCAC GAGGAGTTCT ACCAGGGTAA GAACTTCAGA ATACCCATCC CCAACAAATA TCCTATTTTT ACATTCAGAG CGATCGCAGG AGTTAAGGGC CTGTTCAACA GCGGCTACAA TTACCAGAAT CTTTCCCTGA ATATTTATAA GATGGTATTC CTGGGACAGC TGGGTTACAG TGAGGTCGTT GCAGAAGGTG GCATGATCTT CGGTAAGGTA CCATATCCTT TGCTGACCAT TCACAGAGCG AACCAGTCAT ATGCTTATCA GTTACAATCG TATAACCTGA TGAACTTCCT GGAGTTTGTG AGTGACCGCT ATGCAGGGAT AAATATTGAC CATAACTTTA ACGGATTTAT TTTCAATAAG ATACCTTTGC TGAAGAAACT GAAGTGGCGT GAAGTAGCAA CCATAAAAGT ACTTTATGGT GGATTGAGCA AAGAAAATGA CCCACGTCAG GATCCGTCAA AGATCCAGTT CTCCAATTAT GCAGATGGAA CGCCGATTAC CTATACTTTA GGTAGGGAGC CATATGTAGA AGGTAGTGTT GGTGTTTCTA ATATATTCAA ATTACTCAGG CTTGACCTGG TAAAAAGGTT TACTTATCTG GACAACCCTC TTATTTCCAA CTGGGGTATC AGAGGAAGGG TCAGATTTGA TTTTTAA
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Protein sequence | MNGSKNISLG LLLLLTLGFS SVFAQTTTVK GLVTDKSGSP LPFVSVFVPG TSFGISTDAA GRYELQFDSP KDSVRFSLMG YKAVTIRIQK GQEQVRNMIL DNGAKQLTEF VVKRKKERYR NKDNPAVELI RLVIDNKSKN RMEHYDYANY NQYEKLEFAL SNLSEKIQNS RFTRKYKFVF ENQDTTKMAG RSLLPMYLEE KLADVYFRKD PEKKKTIITA DKKVSFENYI DNRGLSAYLN HIYQDVDIYD NNMMLFTNQF LSPIANAGPT FYRYYIADTI VTADSSKLIV LEFYPRNKTD RLLEGKLYIT LDGNYAIQKA DMTANKEINL NFIRDFHLYM DFEKTPDGRY FMNKNTLMAD FGLFKGSSGL YGERTVSIKN MVINKPMPDG FYAGTAVVQN EDQVQKPDSF WIANRHDSLT TAESKVYQNI DSLQNMKSFK RTLDIATFLL AGWKSAGPKF EIGPVNTFYN FNPVEGFRLR LGGRTTPKFN KSLYLEGYTA YGFKDEKWKY YFGGSYAFNH KSIYDWPVRA LKASYQHDTK IPGQELQFVQ EDNFLLSFKR GNNDKWLYND IYRLFYLHEF DNHSSFQLGF KHWGQTPAGT LSYYKGLTQS DSVKKITTAE LSLELRWAPH EEFYQGKNFR IPIPNKYPIF TFRAIAGVKG LFNSGYNYQN LSLNIYKMVF LGQLGYSEVV AEGGMIFGKV PYPLLTIHRA NQSYAYQLQS YNLMNFLEFV SDRYAGINID HNFNGFIFNK IPLLKKLKWR EVATIKVLYG GLSKENDPRQ DPSKIQFSNY ADGTPITYTL GREPYVEGSV GVSNIFKLLR LDLVKRFTYL DNPLISNWGI RGRVRFDF
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