Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2397 |
Symbol | |
ID | 8358552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2951204 |
End bp | 2952409 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964583 |
Product | Glycine C-acetyltransferase |
Protein accession | YP_003122089 |
Protein GI | 256421436 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.135893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0678456 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAAT TGTTACGTGC AAAGGAAGCC TCATTGGCCA GAGTTCACAC CACTAAGGAA AAAGGGATCT ACCCTTATTT TAGACCGATC TCTTCTTCTC AGGATACTGA GGTGGATATC GACGGTAAGA AGGTGTTAAT GTTCGGATCA AATTCCTACC TGGGACTGAC TAATCATCCC AAGGTAAAAG AGGCGGCCAA ACGTGCCATA GACAAATATG GTACGGGATG TGCAGGGTCC AGATTCCTTA ACGGTACTCT TGACCTCCAT CTGGAATTAG AACGGCGCCT GGCGGAGTAC GTAGGCAAAG AAGCCGCTCT CGTATTCAGT ACCGGGTTTC TGGCAAACCA GGGCGCATTA TCGAGCCTTA CCGGCCGTAA TGATTACATC ATTCTTGACG AACTGGACCA TGCTTCCATT ATCGATGGCA GCCGTTTGTC CTTTTCCAAG GTGATTAAGT ACCGCCATAA TAATATGGAG GATCTGGAAG CCAAACTGTC TGCACTGCCA CAGTCATCGG TACGTCTGAT CGTAGTGGAT GGTGTATTCA GCATGGAAGG CGACATCGCT AAACTGCCTG AAATCGTAGC CCTGGCTGAT ACCTATGGCG CGAACATCAT GGTGGACGAT GCGCACGGAC TGGGTGTGGT AGGTCTGAAT GGCGCCGGTA CGGCTGCTCA CTTCAACCTG ACAGACAAAG TTGACGTGAT CATGGGTACT TTCAGTAAGT CTTTTGCGTC TTTGGGTGGA TTCATCGCAG GCGACGGCGA CGTTATTGAG TACCTGAAGC ACTCTGCCCG CTCACTGATC TTCAGTGCAA GTATGACGCC TGCTGCTGCT GCGAGTGTAC TGGCTACCCT GGATATTATC CAGTCAGAGC CTGAACATAT CCAACGTCTG TGGGATAATA CCAACTATGC GCGTAATCTG CTGAAAGAAG CTGGTTTTGA TACCGGTCAT GTGTCTGAAA CACCTGTTAT TCCGATCTAT ATCAGAAATG AAGAGCAGGT ATTCCGCATT ACCCGTATGC TGCAGGACCA GGGTGTATTT GTAAATCCGG TGGTACCTCC GGCTGTACAG CCAGATGCAA CACTGATCAG ATTCTCTCTG ATGTCTACAC ACACGTTTGC ACAGATTGAA ACTGCTATTG ATAAATTAAC GGAGACATTT ACACTTGCGG GTATACCCTT AAAGCAAAAA ATATAA
|
Protein sequence | MSKLLRAKEA SLARVHTTKE KGIYPYFRPI SSSQDTEVDI DGKKVLMFGS NSYLGLTNHP KVKEAAKRAI DKYGTGCAGS RFLNGTLDLH LELERRLAEY VGKEAALVFS TGFLANQGAL SSLTGRNDYI ILDELDHASI IDGSRLSFSK VIKYRHNNME DLEAKLSALP QSSVRLIVVD GVFSMEGDIA KLPEIVALAD TYGANIMVDD AHGLGVVGLN GAGTAAHFNL TDKVDVIMGT FSKSFASLGG FIAGDGDVIE YLKHSARSLI FSASMTPAAA ASVLATLDII QSEPEHIQRL WDNTNYARNL LKEAGFDTGH VSETPVIPIY IRNEEQVFRI TRMLQDQGVF VNPVVPPAVQ PDATLIRFSL MSTHTFAQIE TAIDKLTETF TLAGIPLKQK I
|
| |