| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2365 |
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| Symbol | |
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| ID | 8358520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2908202 |
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| End bp | 2909530 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644964551 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003122057 |
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| Protein GI | 256421404 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.015095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTAA AAGTATTCAA TCAGTTATCG AATAATCCTA AGTACACCAA AACACTGCAA
TGGGTAAAAC TGGTCAGCGT GACTGGTTTC GCCCAGGTTT TTGTACAGGC GGTCAGTTTA
TTCAGCGGTA TCCTTGTGAT CCGTATGCTG CAACCTGAAG AGTATGCATT GTACACACTG
GCTAACACCA TGCTGGGTAC AATGACGGTA CTGGCCGACG GTGGTATCTC TACCGGTGTG
ATGTCTCAGG GCGGAAAAGT ATGGCAGGAC CGTGACCAGT TAGGCACTGT CCTTGCTACA
GGGATGGACC TTCGCCGCAA GTTTGCGGTG GGCAGTTTAC TGGTGTCGAT ACCGGTGCTC
ATCTACCTGA TGCTGCATCA CGGAGCCAGC TGGCTGATGT CTGTCCTGAT CGTTCTTTCG
CTTATTCCTT CTTTCTTCAT GGCACTGTCA GGTACGATTC TGCAGATTGC GCCGAAGCTG
AGACAGGACA TTGCACCCTT GCAGAAGAAC CAGGTCTACA TGAACTTAGG CAGGCTGGTA
TTGCTGGCAC TGACCATCTT TATTTTCCCT TTTGCTTTTG TAGCAGTACT CGCAGCAGGA
TTGCCACAGA TATGGGGAAA TATGAACCTC CGGAAGATAT CATCCGGGTA TGCGGACTGG
CATAAGAAAC CCGATCCTGC CATCAGGCAG AATATTATGA AGATGGTACG CCGTCTGCTG
CCCATGGGAA TCTACACCTG TCTGTCCGGA CAGATCACGA TCTGGCTGAT CTCCATCTTC
GGTACGACCA AAGGGGTGGC ACAGCTGGGC GCACTGGACA GGTTGTCAAT GGCGCTGAGT
TTTATTACGA TCGTTTTTGG CACTGTGATC TTACCGAGGT TTTCAAGACT GCCTAATAAC
AAGGCGTTGC TGATGCGACG TTTTGTGCAG ATACAGGGGG GATTACTGGC AATGGGTGTC
TGCATCGTTT TTACGGCATG GCTCTTCTCT GCACAGATCC TGAAAATACT GGGACCGAAT
TATTCGAATC TGACAAACGA GGTAGTACTC AAGATCACCA TCAGTTGTCT CGGTATTATC
GCTGCTTCTA CTTTTTCGTT GTTCACAAGC AGGAGCTGGG CTATCAACCC GTTCATCTCC
ATTCCGGTAA GTATTGCATC GATCGCATTG GGCGTCGCAT TTATCGATGT ATCGTCCCTG
CGCGGTGTAC TCTTCATGAA CATCATGATA CAGCTGATAC AGGTAGTGAT GAATGTTTCA
TACACTTTCC TGAAGATCAG CAAAACAAAC AACTCATTAC CCACTGAAAA TAACAAAGAA
ACTATATGA
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| Protein sequence | MRVKVFNQLS NNPKYTKTLQ WVKLVSVTGF AQVFVQAVSL FSGILVIRML QPEEYALYTL
ANTMLGTMTV LADGGISTGV MSQGGKVWQD RDQLGTVLAT GMDLRRKFAV GSLLVSIPVL
IYLMLHHGAS WLMSVLIVLS LIPSFFMALS GTILQIAPKL RQDIAPLQKN QVYMNLGRLV
LLALTIFIFP FAFVAVLAAG LPQIWGNMNL RKISSGYADW HKKPDPAIRQ NIMKMVRRLL
PMGIYTCLSG QITIWLISIF GTTKGVAQLG ALDRLSMALS FITIVFGTVI LPRFSRLPNN
KALLMRRFVQ IQGGLLAMGV CIVFTAWLFS AQILKILGPN YSNLTNEVVL KITISCLGII
AASTFSLFTS RSWAINPFIS IPVSIASIAL GVAFIDVSSL RGVLFMNIMI QLIQVVMNVS
YTFLKISKTN NSLPTENNKE TI
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