| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2236 |
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| Symbol | |
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| ID | 8358388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2752452 |
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| End bp | 2753096 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644964419 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003121928 |
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| Protein GI | 256421275 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATACTG CTGCTACTAA AAATTATTCC AACCTGGTCT TTGATCTTGG CGCCGTGCTG
ATAGATTGGA ACCCGCGTTA TCTGTACAAT AAGATATTTG CGACAGCAGC AGAAACCGAC
TTTTTCCTTG CTAATATCTG TACATCTGCC TGGAATGAAG AGCAGGACGC CGGCAGAAGT
CTGCAGGATG CCACAGAACA GCTGATTACC CAACATCCGC AATTTGAGGC TGAAATAAGG
GCGTTTTATG GTCGTTGGAA GGAAATGCTT GGTGGTCAGA TTGAAGAGAC CGTAGAGGTG
CTCAGAGAGC TCAAAGAATG CAATCAGTTT AAGCTGTACG CCCTGACGAA CTGGTCTAAT
GAAACTTTTC CCCTGGCTTT GGTCACTTAT CCGTTCCTTC AGTGGTTTGA CGGTATTGTT
GTGTCAGGAA GAGAAAAGAT CCGTAAGCCG GATGCAGCAT TCTATAACCT GCTGCTGGAC
CGTTATGACC TGGATCCTTC TTCTACCCTG TTCATTGACG ATAACGAGCG CAATATCCGT
GGAGCAGCCG CTTGTGGTAT TGACGGTATT CATTTTACCT CTGCCATGCA GCTTAAAAGT
GAGCTGGCTG AAAAGGCGGT TTATCTTTCT GCGGTACATT CATAA
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| Protein sequence | MNTAATKNYS NLVFDLGAVL IDWNPRYLYN KIFATAAETD FFLANICTSA WNEEQDAGRS
LQDATEQLIT QHPQFEAEIR AFYGRWKEML GGQIEETVEV LRELKECNQF KLYALTNWSN
ETFPLALVTY PFLQWFDGIV VSGREKIRKP DAAFYNLLLD RYDLDPSSTL FIDDNERNIR
GAAACGIDGI HFTSAMQLKS ELAEKAVYLS AVHS
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