Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_2198 |
Symbol | |
ID | 8358350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2716004 |
End bp | 2717788 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644964382 |
Product | OmpA/MotB domain protein |
Protein accession | YP_003121891 |
Protein GI | 256421238 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000013848 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000000020207 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAACGTA TTTTTCTTAC CATAGCAATG TTTTCAGCAG TAGCCATCAG CAAGGCACAG GTAGCCTACA ACTACCTGAG AGCTGCTGAC TATTACTACA AGAATGCAGA ATATAGTTCT GCTGCACCTT ATTATGAAAA ATACCTGGCA GGCGCCAGGA AGATTGTAAG CGACGCAGCA TACAGACCTT ATAATACACA AGCCTCTGCA AAGAAGTCGC TGGCAACGGT GAGCAGTGAA CAGCAGGCTA TTTACAAACT GGCAGAAAGC TACCGCCTCC TGCACGATTA CAGCAAGGCT GTACCCTGGT ATGCAGAAGC CACTGAGTTT GATAAAACAG CTTTTCCGTT GGCAGGTTAT CACTATGCGG TCGCACTCCG TGCCCTGGGA AGACATGAGC TGGCAGAGAA AGCATTTACT GATTTCCTGA CTTATTATAC TGTAGAAGAT AATTACCGCG CTACCGCACA GCGTGAATTG CAGAATCTGC GTTTTGTAAT CGCTGAAATG GCTAAACCTG ATCTGAACCT GTATAAGGTA GAGAAGGCGC CTACAGTGAT CAATCCTGTA GGAGCCAACT ACGCGCCGGT ATGGTATAAA GAAAATGTAC TGGTATTCAC TTCTACCAGA CCAGATAAGG ATGTAAAAGG ACATGCCTTC GTAAACCGTC TGTATAGCGC GGATTATACA ACAGGACAGC CTGATACTGT CCGCCATCTG GACATCCCAC AACCTAAAGA TGTGGACCAG GGTGTGATGG CCCTGACGCC TGATGGGAAT ACATTATTCC TGACCCGCTG GACAGTAAAG CAGGGTAAGA AAAGTGCGGC TATTTACAGC AGCAAGAAAA CAGGCGATAC CTGGACTGAG CCTGTTATAC TTGATACTGT GCTTAACGTG CCCGGGTTCA GCGCACAGCA GCCTTTTGTA ACTCCTGATG GCAAGCGCCT GATCTATGCG AGTGACAGAC CCGGCGGCGC GGGCGCATTT GATCTCTGGG AAGCAGAGCT GAATGGAGAA GGCACGCCTT TCTTTACAAA GAACCTGGGA CCAGTTGTGA ACACCCCATG GAATGAAGAA GCGCCCTATT ACCATGCAGC TTCCGGTTTA CTGGTATTCT CTACTGATGG TCGTGTGGGT ATGGGTGGAT TTGATTTCTT CTATTCAAAA GATTCAGCAG GTGCATGGTC CGCACCAGTG AATTTTGGTT ATCCGGTGAA TTCTGTCAAG GATGATATGT ACTTCACCAG TAAGGGCAGT AAAGAAAATA TTCTGGAATC GGTATGGCTG TCTTCTGACA GAGATGCTGC CTGCTGCCTG GAACTGTTTT CACTGAAGAA GGTAGTACCA CCGCCGCCGC CACCTCCACC AGCACCAAAG CCCGAACCAC AGATTATTGC ACTGGAGCCG CCAACAACCG ATGGACCTAT TGTGCTTGAA AATGTGTACT ACGACTTCAA CGAGTCTTAT CTGCAACCTG CTTCTTTCCC TTCACTGGAC AGACTGGTAG CAATGCTGAA GAAGTATCCT AAGATCGTGA TCGAGCTGAG TGCGCATACG GATAGTAAAG GTTCAAATGA CCTGAACGAA AAATTATCTG ATGCACGTGC GAAGAGCTGT GTAGACTACC TGGTAAGTCA GGGTATTGAA AGTACCCGTC TGCAGGCAAA AGGATACGCT GCTTCCCATC CGGTAGCACC AAACACCAAT AAGGATGGTT CTGATAATCC TGAAGGCCGT GCGCGTAACC GTAGAACGGA ATTCAAGATT CTCAGCCGCG AATAA
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Protein sequence | MKRIFLTIAM FSAVAISKAQ VAYNYLRAAD YYYKNAEYSS AAPYYEKYLA GARKIVSDAA YRPYNTQASA KKSLATVSSE QQAIYKLAES YRLLHDYSKA VPWYAEATEF DKTAFPLAGY HYAVALRALG RHELAEKAFT DFLTYYTVED NYRATAQREL QNLRFVIAEM AKPDLNLYKV EKAPTVINPV GANYAPVWYK ENVLVFTSTR PDKDVKGHAF VNRLYSADYT TGQPDTVRHL DIPQPKDVDQ GVMALTPDGN TLFLTRWTVK QGKKSAAIYS SKKTGDTWTE PVILDTVLNV PGFSAQQPFV TPDGKRLIYA SDRPGGAGAF DLWEAELNGE GTPFFTKNLG PVVNTPWNEE APYYHAASGL LVFSTDGRVG MGGFDFFYSK DSAGAWSAPV NFGYPVNSVK DDMYFTSKGS KENILESVWL SSDRDAACCL ELFSLKKVVP PPPPPPPAPK PEPQIIALEP PTTDGPIVLE NVYYDFNESY LQPASFPSLD RLVAMLKKYP KIVIELSAHT DSKGSNDLNE KLSDARAKSC VDYLVSQGIE STRLQAKGYA ASHPVAPNTN KDGSDNPEGR ARNRRTEFKI LSRE
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