| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2167 |
|---|
| Symbol | |
|---|
| ID | 8358319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 2650634 |
|---|
| End bp | 2651623 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644964351 |
|---|
| Product | molybdopterin dehydrogenase FAD-binding |
|---|
| Protein accession | YP_003121860 |
|---|
| Protein GI | 256421207 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGT TCAGCTACAT AAGGGTCACT TCCAGTGATG CAGCCATTGC TGCTGTCTCC
AAAGATAAAT CGGCTACATT CCTGGCCGGT GGTACCAATC TTGTCGATCT GATGAAGAGT
GGTGTAACGG GACCGGAGCG ACTGGTAGAT ATTAATCGCC TGCCCCTTAC AAAGATCGAA
GAAACAAAGA CGGGATTGCG TATCGGCGCA CTGGCTAAAA ATACAATGGT AGCGGAACAT
CCCCTGGTCG TCAAACATTT TCCGCTCCTG TCTCTCGCAT TAAAAGCAGG CGCTTCTCCA
CAGCTGAGGA ACATGGCCAC TGTCGGTGGT AATATGATGC AGCGTACGCG TTGTCATTAT
TTCTACGATA CAGCCATGCC TTGTAATAAA CGAAATCCTG GTTCCGGTTG CGGCGCTATC
GGAGGCGTCA ACCGTATGCA CGCCATCTTC GGTGCAAGTG ATAAATGTAT TGCCGTACAT
CCAAGCGATA TGTGTGTGGC ACTGACAGCA CTGGATGCAG TCGTAACAGT AAAAGGCCCC
AAAGGGGAAC GTAAAATTCC TTTTGGCGAT TTTCACCGTT TACCGGGAGA TACGCCTGAA
GTGGACAACA CCTTACAGCG TGGAGAACTG ATCATAGCGG TGGATATTCC TTTCAATGAA
GTAGGTGGAT ATGCGCATTA TCTGAAAGTA CGTGACCGTG CCTCCTATGC ATTCGCATTG
GTATCAGTTG GCGCTGCCTT GTCCCTGAAA GACAATAATA TCGCTGATGT ACGCCTGGCT
ATGGGTGGCG TGGCGCATAA ACCCTGGCGG CTGAGAGAAG CGGAAGCTTT CCTCAAAGGA
AAGAAGGCCA CGGTAGAGAA CTTTCAGGAG GCGGCACGTA TGGTGATGGC GCCTGCAAAG
TCGCAGGGCA GTAATGAATT CAAACTCACC CTCGCGCCCA ACACAATTGT GGAGGCATTG
AAACTCGCCG CTGCAAACGG TAATATCTAA
|
|---|
| Protein sequence | MKQFSYIRVT SSDAAIAAVS KDKSATFLAG GTNLVDLMKS GVTGPERLVD INRLPLTKIE
ETKTGLRIGA LAKNTMVAEH PLVVKHFPLL SLALKAGASP QLRNMATVGG NMMQRTRCHY
FYDTAMPCNK RNPGSGCGAI GGVNRMHAIF GASDKCIAVH PSDMCVALTA LDAVVTVKGP
KGERKIPFGD FHRLPGDTPE VDNTLQRGEL IIAVDIPFNE VGGYAHYLKV RDRASYAFAL
VSVGAALSLK DNNIADVRLA MGGVAHKPWR LREAEAFLKG KKATVENFQE AARMVMAPAK
SQGSNEFKLT LAPNTIVEAL KLAAANGNI
|
|---|
| |