Gene Cpin_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2158 
Symbol 
ID8358310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2640104 
End bp2641093 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content47% 
IMG OID644964342 
Productmolybdopterin dehydrogenase FAD-binding 
Protein accessionYP_003121851 
Protein GI256421198 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATT TCACATATAC AGAGGCATCT GATATCGATA ATGCTGTGAA CGAAATGGCA 
GGACATGCTG CGGCAATGTT CGTAGCAGGC GGTACCAATC TGATAGACCT GATGAAAGAA
AATGTCCTGC ATCCTGGCCA TCTGATAGAT ATTAACAGAT TACATCTGGA CAGTATTGAG
TTGCTGGATG ATGGTCGCCT GTTTCTGGGA GCGTTGGCGA CAAATGCTGA TACTGCCTGG
CATTCCCTGG TTGAAAAAAG ATATCCGCTG CTGGCCGATG CAATACTGGC CGGAGCTTCT
CCTCAGCTGC GCAATATGGC TACTAATGGT GGTAACCTGA TGCAGCGTAC AAGGTGTTAT
TATTTTTATG ATACATCTAC TCCCTGTAAC AAGCGGCTGC CGGGAAGCGG TTGTTCGGCT
TTGCGGGGGT ACAATCGTAT TCATGCCATA ATGGGTACCA GTCAGGAATG TATAGCGGTG
CATCCCAGTG ATATGTGTGT GGCTCTCAGG GCATTAAATG CGGTGATACA GGTAAGGGGA
CAGCAGGGGG AAAGATTGAT CCCTATTGCA GATTTCCACC GGTTAGCAGG AGACACGCCT
CATATTGACA ATAACCTGGC ACACGATGAA CTGATTACCG GTATTATACT ACCAAATGAA
CGTTTTACGG CGAATTATAA ATATCTGAAG GTAAGAGACA GGGCTTCTTA TGCATTCGCA
CTGGTGTCTG TAGCCGTTGT ATTGCAATTG GAGGGCGATA TAATATCCAA TATCAGAATA
GCTATGGGAG GTGTAGCGCA CAAGCCCTGG CGGGATGAAT CGGTGGAAGC GGAGCTGAAA
GGTAAATCTG CCACAATTGA AACCTTTGCA GCCGCAGCTG ACAGAATATT GAAGGATGCT
GTCACTTTCG GGACAAATGA TTTTAAACCG GCGCTTGCAA AACGTGCGAT CATACGTGCG
TGTAAGGAAG CTCTAAATCG GGAAAAATGA
 
Protein sequence
MNNFTYTEAS DIDNAVNEMA GHAAAMFVAG GTNLIDLMKE NVLHPGHLID INRLHLDSIE 
LLDDGRLFLG ALATNADTAW HSLVEKRYPL LADAILAGAS PQLRNMATNG GNLMQRTRCY
YFYDTSTPCN KRLPGSGCSA LRGYNRIHAI MGTSQECIAV HPSDMCVALR ALNAVIQVRG
QQGERLIPIA DFHRLAGDTP HIDNNLAHDE LITGIILPNE RFTANYKYLK VRDRASYAFA
LVSVAVVLQL EGDIISNIRI AMGGVAHKPW RDESVEAELK GKSATIETFA AAADRILKDA
VTFGTNDFKP ALAKRAIIRA CKEALNREK