| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2119 |
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| Symbol | |
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| ID | 8358271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2599276 |
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| End bp | 2601708 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644964304 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003121813 |
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| Protein GI | 256421160 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01634] phage tail protein, P2 protein I family
[TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTAC TTCAGACCTT ACTTTTAATG CTCCTGGCAT TCAGTCCTTG CGCACTCTTC
GCAGAAGACG GAAACGGAGT CGTTAAAGGT ACAGTTAAGA CGACAGATGG AAAGGCAGCT
GCAATGGTAT CAGTAACATT AAAAAATACT AAGAAATCGA CCATTACAGA CGAAAATGGC
GCTTTTTTAC TGAACAATGT GAAACCTGGC ACCTACACCT TACAGGTTAC CCTGCTGGGC
CACGGCGCAA AAGAAGAAAC TGTTATCGTC TCCTCTGATA ATACAACCGA GATCAACGTC
ACCTTACAAC TGTCAGATAT CCAGTTGCAG GAAGTGGAAG TAGCGACAGG CCGTAGTAAG
TTCGCAAAAA AAGAATCTGA CTACGTAGCG CGCCTCCCTT TAAAAAACCT GGAAAATCCA
CAGGTATACA ACGTTGTATC TAAAGAACTG CTGCAGGAAC AGGTAGTAAC CAACTTCGAC
GACGCATTGA AAAATACACC GGGTGTAACC AAACTCTGGT CATCTACAGG CCGGCCTACT
GACGGCGCCG GCTATTTCTC TATGCGTGGT TTCAGCGTAC AGCCAACCAT GATCAATGGT
ATCCCGGGCC TGACTAACGG TGGTATCGAT CCTGCTAACG TAGAAAGAAT CGAATCTATC
AAAGGTCCTT CCGGTACCCT GTTTGGTAGC AGCTATATTT CCTTCGGTGG TTTGCTGAAC
ATCGTTACTA AAAAACCTTA CGAAACTTTC GGTGGTGAAA TCAGTTACAC TGCCGGCGGA
TTTGGCCTCA ACCGTGTAAC AGCCGACGTC AACGCACCGC TGAATGCTGA TAAAACAGCT
TTACTGCGTG TGAATGCCGC TTATCACAAT GAAGGCAGCT TCCAGGATGC AGGTTTCAAA
AAGTCCTTCT TCTTCGCACC AAGCTTCTCT TATAAAGCGA GCGATAAATT ATCCTTCCTG
GTAAATGCAG AATTCTACAA TGCTGAAAGC ACCAATGCGC TGATGGTATT CCTGAACAGA
TATCGTCCGC TGATCGCAAA AACGCCTGAA CAACTGCACA TGGATTTTGA CAGATCTTAC
ACCAGCAACG ATCTGACACA TAAAACGCCT ACCGTAAACC TCTATGGTCA GGCTAATTAT
AAGATCTCTG ATAAGTGGAC GTCCCAGACT GTATTGTCAA GAAGCTCTCG TAAAAGCGAT
GGATATTATT CCTATGTAAT GTTCCTGGAT ATGGGCCCTA ATGGAAGTCC CGGACCAAAC
GATACATTAC TGAGCCGTTT TGCATACTAT CAGAACTCCA CCACTACCAC TACCGATATC
CAGCAGAACT TCATCGGTGA TTTCAACATC GGTAGCCTGC GTAACCGTGT AGTATTCGGT
CTGGATTTCA ATGATCAGAG CACCGTGAAT AATAACAGCG CATACGCACT GTTTGACTTC
GTGAACGTTA CACGTAATGA CGATCCACGC TACGCACAGC TGACAAAAGC TGCGGTAGAT
GCGAAACTCG GCGGACAAGG CGGTACCAAA GACGGTAACA GTGCACAGGT ATACAGCGCC
TACATCTCCG ATGTACTGAA TATCACAGAC GCGTTAAGCG CCATGGCGAG CTTGCGTGTG
GACCGCTTCG AAAGCAAAGG ATACACAGAT TTCGCAACCA ATACCACCAG TGATAAATAC
GGCCAGACTG CAGTGTCTCC GAAATTTGGT CTGGTATACC AGATCGTTAA AGACCAGGTA
AGCGTATTCG GTAACTATAT GAACGGTTTC AGTAACACCG CTCCGGGTGT AAGAGTACTA
CCTGACTACA CTAACATCTT CAAGCCACAA CAGGCTAATC AGTGGGAAGG TGGTGTAAAA
CTGGATGTAC TGAACCACAA AGTAGCCCTG ACGGCCAGCT ACTACGACCT GCTGGTGTCT
AACATGACCC GCCAGATCAC CGTAGAACGT GAAGGTACCG CCTACAATGT GACCATCCAG
GATGGTAAAC AGAAAAGTAA AGGCGTTGAA TTTGACCTGA TCGCTAATCC GCTGCCAGGT
CTGAACATCG TAGCAGGTTA TAGCTACAAT GACAGCAAAG CTTTACAGAT AGATGCGGAA
TACCTGAACA GAAGACCAGT ATCTGCCGGT CCTGCTAACC TGGCAAATGC CTGGATCAGC
TACGCCTTTA CCAAAGGCGC TGTAAAAGGT CTTGGTCTGG GCTTCGGTGG TAACTATGCC
AGTGATAACA ACGTGACTAA CGGTCTGACC ACAGGTCTGT TCACACTGCC TTCTTACACC
ATCCTGAATG CATCTGTATT CTACAATGCA AAATCATACC GCCTCGGTGT AAAACTGGAT
AACGTCAGCA ACAAGGAATA TTTCTCCGGA TGGACTACCC TGGAGAAACA AATGCCAAGA
CGTCTGTCAG TAAATGCTAC TTTCAGATTC TAA
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| Protein sequence | MRLLQTLLLM LLAFSPCALF AEDGNGVVKG TVKTTDGKAA AMVSVTLKNT KKSTITDENG
AFLLNNVKPG TYTLQVTLLG HGAKEETVIV SSDNTTEINV TLQLSDIQLQ EVEVATGRSK
FAKKESDYVA RLPLKNLENP QVYNVVSKEL LQEQVVTNFD DALKNTPGVT KLWSSTGRPT
DGAGYFSMRG FSVQPTMING IPGLTNGGID PANVERIESI KGPSGTLFGS SYISFGGLLN
IVTKKPYETF GGEISYTAGG FGLNRVTADV NAPLNADKTA LLRVNAAYHN EGSFQDAGFK
KSFFFAPSFS YKASDKLSFL VNAEFYNAES TNALMVFLNR YRPLIAKTPE QLHMDFDRSY
TSNDLTHKTP TVNLYGQANY KISDKWTSQT VLSRSSRKSD GYYSYVMFLD MGPNGSPGPN
DTLLSRFAYY QNSTTTTTDI QQNFIGDFNI GSLRNRVVFG LDFNDQSTVN NNSAYALFDF
VNVTRNDDPR YAQLTKAAVD AKLGGQGGTK DGNSAQVYSA YISDVLNITD ALSAMASLRV
DRFESKGYTD FATNTTSDKY GQTAVSPKFG LVYQIVKDQV SVFGNYMNGF SNTAPGVRVL
PDYTNIFKPQ QANQWEGGVK LDVLNHKVAL TASYYDLLVS NMTRQITVER EGTAYNVTIQ
DGKQKSKGVE FDLIANPLPG LNIVAGYSYN DSKALQIDAE YLNRRPVSAG PANLANAWIS
YAFTKGAVKG LGLGFGGNYA SDNNVTNGLT TGLFTLPSYT ILNASVFYNA KSYRLGVKLD
NVSNKEYFSG WTTLEKQMPR RLSVNATFRF
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