| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_2110 |
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| Symbol | |
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| ID | 8358262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2586629 |
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| End bp | 2588059 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644964295 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003121804 |
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| Protein GI | 256421151 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.104325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG CTATTATCAT ATTATCGGCG GTATTGATGG CGGGCAGCCA GTATAGCTGT
AAGAAGCAAC TGGACGAGCT GCCGAAAGAC GCGCTGGTGC AGGGAAATAC AATTGTCAAT
CAGCAAACGG CTAACATTGC GCTCAACGGG GTGTATTACC GTTTTGCCAA CGCTTCACAA
ACAAATACGA ACTGGACGAA TAACCAGGTT AATACGGCTA TACTGGCAGG CGTACTGGAT
GATGGGCGTA ATACATTGAA TGAAGCGAGT AATGTATTAG GAAGGACCAA TTTCAATAAT
GACTGGGGGC GTTATTACTC CCTCGTGAAT GCGGCCAATG GTATCATAGA CCAGGTGACT
GCACTCAGCG GAACCTTATT TTCCAATGGC AGAAAAGAGC AGATACTGGC GGAGGCCAGG
TTTATGCGGG CCTTTGCTAT ATTCAAGGTG CTGACACTGA TGGGCCAGTG GTTTGATATT
AACAGTAGTT ACGGGGCGCT GTTGCATGAC AAGTTCCTTA CCTCTACTAC TTATGCCAGG
GCACGTTCTG ATGTCAAGAG CAGTTATCAG TTCATATTGT CAGACCTGGA TTATGCGGTA
GAGAATGCCG CTACATCCGG TAGCAATGTG TACGTCACAA AATGGGCGGC GATGGCATTG
AAGATGCGTG TGCTGTTAGC AAGGGGCCAG CAGGAGGATT ATGCACAGTG TGCCGCTATT
GGAAATAATG TTATCAGCAG CAGTGGTTAT GTGTTAGAAC CGAATACCCG TGATATCTTC
TATGTAAAAG GGCTGAGCAG TAAAGAGGTG ATACTGGGCG TTACACCACA GGCTAACCAG
GGGGCTTACT ACTATAATAC CAGCGGTGTA TATGTACGGC GTAACTTTTT TTATGTAGCA
ACGACGCTAT TAAAAGATCT GCTGGCAAAT GATCCGCGTC AGCAATGGTA TATCGGCAAT
GCGAATGGTG ATAAGGCAGG TACATTTTAT TTTATAAAGT ATGTACAATC CACACTGACT
ACGACACAGT TATCGGAAGT GGCGTATGCG ATCCGTTTGT CTGAGGTCTA CCTGATGACG
GCTGAAGCGA CGATCCGTTC CGGCGGTAGT CTGGCTGTTG CAAAGGGACT GATACACGCT
GTACAAGCGG GCGCCGGTAT TACTGCAACA GACAATACGA CCAGCTATCT GGCGGTTGAG
CAGGCAAATA CGGCGGACGA TCTGTTGTTG CAGGGTTACT ATGAGTATGT GAAAAGCTTT
GCAGGGGAGG ATGATCAGTA TTACTTCGCC TTGCTGCGTT TTCCACTGGC GACTGTTACT
ACGCTACGAC CAACTATCAA AAATAAAGAA CAATACATTT ACCCTGTTCC GAGGTCAGAG
TTTGTCAACA ATCCACTGAT CGGCGCACAG AATCCGGGAT ACACGCAATA A
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| Protein sequence | MKKAIIILSA VLMAGSQYSC KKQLDELPKD ALVQGNTIVN QQTANIALNG VYYRFANASQ
TNTNWTNNQV NTAILAGVLD DGRNTLNEAS NVLGRTNFNN DWGRYYSLVN AANGIIDQVT
ALSGTLFSNG RKEQILAEAR FMRAFAIFKV LTLMGQWFDI NSSYGALLHD KFLTSTTYAR
ARSDVKSSYQ FILSDLDYAV ENAATSGSNV YVTKWAAMAL KMRVLLARGQ QEDYAQCAAI
GNNVISSSGY VLEPNTRDIF YVKGLSSKEV ILGVTPQANQ GAYYYNTSGV YVRRNFFYVA
TTLLKDLLAN DPRQQWYIGN ANGDKAGTFY FIKYVQSTLT TTQLSEVAYA IRLSEVYLMT
AEATIRSGGS LAVAKGLIHA VQAGAGITAT DNTTSYLAVE QANTADDLLL QGYYEYVKSF
AGEDDQYYFA LLRFPLATVT TLRPTIKNKE QYIYPVPRSE FVNNPLIGAQ NPGYTQ
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