Gene Cpin_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_2010 
Symbol 
ID8358161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2452180 
End bp2453181 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content49% 
IMG OID644964197 
Productformiminoglutamase 
Protein accessionYP_003121706 
Protein GI256421053 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 
TIGRFAM ID[TIGR01227] formimidoylglutamase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.547952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0717595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGC CAGATTTTTA CAGACAGCCT GTAGCGTGGA CAGGAAGGAT CGATGGGACA 
GACGAAGAAT TACTGCGCTG GCACCAGCGG GTCACTCCTG TGAACCTGCT GACCGGATCA
TTGCCCTCAT TAAAGCCGCA TCAGCAGGGT GTGGCGTTTC TTGGATTTGC GAGTGATGAA
GGCGTGCGCC GCAATAAAGG CCGTGTAGGT GCGGCTGAAG GTCCGGCTGC ATTAAGAACG
GCCAGTAGTA ATTTTCCTGT TCATTTTGAC GGTGAGCTGA TACTGGCAGA TGTGGGTGAT
GTGATATGTA AGGATGACTT ACTGGAGGAA GCACAACAGA CATTATCGGA TACAGTACTG
ACTATACGTA AGGCGGGTTA TTTACCGGTA TTACTGGGTG GTGGTCATGA GATCACTTAT
GGACATGCAC ATGGTATTTA TCAGCACCTG CGAGTACGTA AACGTGGAGA GAAACTGGGG
CTGCTGAATT TTGATGCACA TTTTGATCTG CGGATGAAAG GCGAGGAGGG GAGTACTTCC
GGTACAGGGT TCTGGCAGCT GGCGCAGGAC TGTAAACTGG AAGGCGCACC ATTTTATTAT
CTCGCACTGG GTATCCAGGC AAACAGTAAT ACACAACAGC TGTTCCGTAT CGCGGGTGAC
CTGGATGCGC AGTATGTGGA TGCAGACGCT TTTCACTTAC AGGATAAAGC GCTTTTACAT
GCCGCTATCG GGCAGTTCCT GAGAGATGTG GATCATGTAT ACCTGACCAT CGATCTGGAC
GTATTTTCGG CTGCTTTTGC CCCTGGGGTG AGTGCGACTG CCTATAACGG TATAAGACCT
GATGGTTTGT TCCTGGAATG TTACCGTAAT ATTCTGCAAA GTGGTAAACT GGCGGGTATC
GATATCGCAG AACTGAACCC TTCCCTGGAT GTGGATAACC GGACTGCGAA ACTGGGTGCT
GCCTTGTTAT TTGAAATGAT CAGCAATCTG CATTACCATT AG
 
Protein sequence
MMKPDFYRQP VAWTGRIDGT DEELLRWHQR VTPVNLLTGS LPSLKPHQQG VAFLGFASDE 
GVRRNKGRVG AAEGPAALRT ASSNFPVHFD GELILADVGD VICKDDLLEE AQQTLSDTVL
TIRKAGYLPV LLGGGHEITY GHAHGIYQHL RVRKRGEKLG LLNFDAHFDL RMKGEEGSTS
GTGFWQLAQD CKLEGAPFYY LALGIQANSN TQQLFRIAGD LDAQYVDADA FHLQDKALLH
AAIGQFLRDV DHVYLTIDLD VFSAAFAPGV SATAYNGIRP DGLFLECYRN ILQSGKLAGI
DIAELNPSLD VDNRTAKLGA ALLFEMISNL HYH