Gene Cpin_1914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1914 
Symbol 
ID8358065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2336716 
End bp2337630 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content51% 
IMG OID644964102 
Product1-aminocyclopropane-1-carboxylate deaminase 
Protein accessionYP_003121611 
Protein GI256420958 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2515] 1-aminocyclopropane-1-carboxylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTCG ATTACGACAA TATACAACTG CAGTTTATCA CACCATCCTG GTTACCTTCC 
GCTATCCGCG CCGCTGTATT ACGGCTGGAT CTGCTGCATC CGGAAGTATC GGGTAACAAA
TGGTTCAAAC TCAGGTATAA CCTGGAAGCA GCCATCAGGG AAGGCAAAAA TCGTATTGTC
ACTTTCGGAG GCGCTTATTC CAATCACATT GCCGCTACGG CCGCTGCCTG TCAGCTGGCA
GGTATTTCCT GCACCGGTAT TATCAGAGGA GAAAGCGCGC CTGTATTAAG TCATACCTTG
CAGGAAGCAG CTGCCCGCGG CATGGAGCTG GTGTTCATCA GCCGGGAAGC TTATCGGCTC
AAAGCGAAAA CGGACTGGGC CGCACTGTAT CCGGATGCCT GGATCGTACC GGAAGGAGGT
AGTAATGCCC TGGGCGCAAA GGGTTGTGAA GAGATCCTGC CACTTGCTGT AAAGCAGTTG
ACTACCGTTG ATAAAGGTGT TATTTCTCCG GCAACAGCTG CTGCATACTT TAGTCACATT
GCCTGTGCGG TTGGCACCGG TACGACATTA GCCGGTATTA TCAACAGTGC AGCACCGCAG
CAGACTGTTT TTGGTTACGC CGTATTAAAA GGGGCCGCCT ACCTACAGGA GGAAATACAG
GCACTGCTAC ACCCCGCTCC AGTTCCTCAC TGGGAACTGC TCCATGAACA TCATGGCGGA
GGCTATGCGA AAGTGACACC CGCCTTAAAG ACGTTCATGG CTGACTTTCA TACTGAAACC
GGTATTGAAC TGGACATGGT CTATACTGCC AAGCTACTGA TGGGCTTCCG TCAGGATGTA
CTGGATGGCA GATATGCTGA TGGCAGTAAG GTGTTACTTA TCCACACCGG CGGATTGCAG
GGAAACGCCA TATAG
 
Protein sequence
MQFDYDNIQL QFITPSWLPS AIRAAVLRLD LLHPEVSGNK WFKLRYNLEA AIREGKNRIV 
TFGGAYSNHI AATAAACQLA GISCTGIIRG ESAPVLSHTL QEAAARGMEL VFISREAYRL
KAKTDWAALY PDAWIVPEGG SNALGAKGCE EILPLAVKQL TTVDKGVISP ATAAAYFSHI
ACAVGTGTTL AGIINSAAPQ QTVFGYAVLK GAAYLQEEIQ ALLHPAPVPH WELLHEHHGG
GYAKVTPALK TFMADFHTET GIELDMVYTA KLLMGFRQDV LDGRYADGSK VLLIHTGGLQ
GNAI