Gene Cpin_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1908 
Symbol 
ID8358059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2329771 
End bp2330604 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content47% 
IMG OID644964096 
Producthypothetical protein 
Protein accessionYP_003121605 
Protein GI256420952 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGCAT CACGTTTCAT ATCGTCCGGA TTGATCGAAG CTTATGTTAG CGGACTCGCC 
ACCTCCAACG AGATAGAGGA GCTGAAACGC GGTATGGCAC AATATCCGGA AGTGAGAGCT
GCAGTGGATG ACTGTCAGCT CGATATGGAA CATTACGTTA CATTACAGGC GAAAACACCA
GCACCTGAAT TAAAACAGAA TATCCTCCGT ATCATTGCTG ACGAAGAGAC TGCCAGAGAA
AACGGAACTT ACGTTGAACA GACCGAAGTC GCTTTCCCTA ACGAAGAAAA AGTTTATGTA
AGCAGTGCCT GGCGCTGGAT TGCAGCTGCC GTGTTTGTTG CACTGCTCGG TAGCCTGTAT
ATGAATTACG TTTACTCGGG GAAAATCAAT GACTACAAAG GTCGCTACGA AGCATTACTC
TCCTCACAAA ATTCACTGGC GTCAGAATCC AATCTGTACC GCACCCGCCT TGAGCAAATG
GAAGCTTCTG TCAACATCGT TAAAAGCCCT TCCATTAAAG CGGTAAAGAT GCCTGGCACC
AAACCTTTTC CCACCGCACT CGCTACCGTA TACTGGAATC AACAATCCAA GGAAGTGTTC
GTCATGGTGA ATAACCTGCC AGAACCTGCT GCTGATAAGC AATATCAGCT CTGGGCCATC
GTAGATGGTA AACCCGTCGA TATGGGCGTA TTCGAAACAG GCAATAAAGA TGAATTGCTG
CACAAGATGA AATCCATCGA CAATGCAGAG ATGTTTGCCA TCACACTCGA AAAGAAAGGC
GGTAGCCTGG TTCCCACACT TGATCAGATG TACGTCGCAG GAAAAGCCAG CTAA
 
Protein sequence
MDASRFISSG LIEAYVSGLA TSNEIEELKR GMAQYPEVRA AVDDCQLDME HYVTLQAKTP 
APELKQNILR IIADEETARE NGTYVEQTEV AFPNEEKVYV SSAWRWIAAA VFVALLGSLY
MNYVYSGKIN DYKGRYEALL SSQNSLASES NLYRTRLEQM EASVNIVKSP SIKAVKMPGT
KPFPTALATV YWNQQSKEVF VMVNNLPEPA ADKQYQLWAI VDGKPVDMGV FETGNKDELL
HKMKSIDNAE MFAITLEKKG GSLVPTLDQM YVAGKAS