Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1908 |
Symbol | |
ID | 8358059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 2329771 |
End bp | 2330604 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644964096 |
Product | hypothetical protein |
Protein accession | YP_003121605 |
Protein GI | 256420952 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGCAT CACGTTTCAT ATCGTCCGGA TTGATCGAAG CTTATGTTAG CGGACTCGCC ACCTCCAACG AGATAGAGGA GCTGAAACGC GGTATGGCAC AATATCCGGA AGTGAGAGCT GCAGTGGATG ACTGTCAGCT CGATATGGAA CATTACGTTA CATTACAGGC GAAAACACCA GCACCTGAAT TAAAACAGAA TATCCTCCGT ATCATTGCTG ACGAAGAGAC TGCCAGAGAA AACGGAACTT ACGTTGAACA GACCGAAGTC GCTTTCCCTA ACGAAGAAAA AGTTTATGTA AGCAGTGCCT GGCGCTGGAT TGCAGCTGCC GTGTTTGTTG CACTGCTCGG TAGCCTGTAT ATGAATTACG TTTACTCGGG GAAAATCAAT GACTACAAAG GTCGCTACGA AGCATTACTC TCCTCACAAA ATTCACTGGC GTCAGAATCC AATCTGTACC GCACCCGCCT TGAGCAAATG GAAGCTTCTG TCAACATCGT TAAAAGCCCT TCCATTAAAG CGGTAAAGAT GCCTGGCACC AAACCTTTTC CCACCGCACT CGCTACCGTA TACTGGAATC AACAATCCAA GGAAGTGTTC GTCATGGTGA ATAACCTGCC AGAACCTGCT GCTGATAAGC AATATCAGCT CTGGGCCATC GTAGATGGTA AACCCGTCGA TATGGGCGTA TTCGAAACAG GCAATAAAGA TGAATTGCTG CACAAGATGA AATCCATCGA CAATGCAGAG ATGTTTGCCA TCACACTCGA AAAGAAAGGC GGTAGCCTGG TTCCCACACT TGATCAGATG TACGTCGCAG GAAAAGCCAG CTAA
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Protein sequence | MDASRFISSG LIEAYVSGLA TSNEIEELKR GMAQYPEVRA AVDDCQLDME HYVTLQAKTP APELKQNILR IIADEETARE NGTYVEQTEV AFPNEEKVYV SSAWRWIAAA VFVALLGSLY MNYVYSGKIN DYKGRYEALL SSQNSLASES NLYRTRLEQM EASVNIVKSP SIKAVKMPGT KPFPTALATV YWNQQSKEVF VMVNNLPEPA ADKQYQLWAI VDGKPVDMGV FETGNKDELL HKMKSIDNAE MFAITLEKKG GSLVPTLDQM YVAGKAS
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