Gene Cpin_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1906 
Symbol 
ID8358057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2328125 
End bp2328988 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content49% 
IMG OID644964094 
Producthypothetical protein 
Protein accessionYP_003121603 
Protein GI256420950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGTTC AACGTTACAT ATCGTCCGGT GTTATTGAAA ACCATGTTAC GGGATTACTA 
TCAGAACCAG AATCACGTGA GGTTGTCAGT GCCATTCAGC AACATCCTGA GGTAAAGGCT
GCTGCCGATG CCGTACAGGA TGACATGGAA CGCTACATAC AGCTGTGGGC TCAAAAGCCG
CCGGCAGGTA TCCGGCGCCA GTTGATGGAA CGTTTACACA AAGACGATGT ACGGGAAGAA
CCAGTCGCTG CCGCAACGCC TGCATTAAGC ACAGCAACAT ACGAAGACAT TTTCTCCGAA
GATAAAAAAG GGGCAAACAG CTCTCCATCA CGTGTATGGC AATACACTGC CGCCGCAGCA
ATCGCGTTGT TACTAGGTAG TGTAAGCATG AATATTATGT CATACAGCAA ATCAGACAGC
GTTACCGGAC AGCTTGCCAG CCTGCAGGAT GAACAGGTAG CTCTCTCCGC AGAGAAAGAT
GCGCTGAAAG AACAGCTTGA TTATGCACAT AAGGAACTGG GTTTGATGAA AGATCCTTCT
TTCAAATGGA TCCGTATGCC AGGCGTCGGT AAACATACCG GTGCATTTGC CACTATCGGG
TGGAATCCTC AGTCAAAAGA AGCATTCATC CTCGCTCAGG CATTACCTGA GCCTCCTGCA
GATAAACAAT ACCAGCTCTG GGCAATCGTA AACGGAAAGC CTATCGATGC AGGTGTATTC
GAACTGGGCG CAAAAACGCA TACCTTACAA AAGGTGAAAC CAGTTGAAAA TGCCCAGGTA
TTCGCAGTAA CCCTCGAAAA GAAAGGCGGC AGCCCCGAAC CGACACTCGA ACAAATGTTC
GTCGCGGGTA AAGTGGCAGG TTGA
 
Protein sequence
MDVQRYISSG VIENHVTGLL SEPESREVVS AIQQHPEVKA AADAVQDDME RYIQLWAQKP 
PAGIRRQLME RLHKDDVREE PVAAATPALS TATYEDIFSE DKKGANSSPS RVWQYTAAAA
IALLLGSVSM NIMSYSKSDS VTGQLASLQD EQVALSAEKD ALKEQLDYAH KELGLMKDPS
FKWIRMPGVG KHTGAFATIG WNPQSKEAFI LAQALPEPPA DKQYQLWAIV NGKPIDAGVF
ELGAKTHTLQ KVKPVENAQV FAVTLEKKGG SPEPTLEQMF VAGKVAG