Gene Cpin_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1902 
Symbol 
ID8358053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2325595 
End bp2326461 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content48% 
IMG OID644964090 
Product4-hydroxybenzoate polyprenyltransferase 
Protein accessionYP_003121599 
Protein GI256420946 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACAA CGGTTAATAA ATATCTATCG CTGGTTAAAT TCAGCCATAC CATCTTCGCA 
ATGCCTTTTG CATTGACGGG CTTTTTCATT GCTACGATCA AGACGGATGC CTCTTTCAGC
TGGCAGTTAT TCTTACTGGT AGTGCTTTGT ATGGTTTTCG CACGGAGTGC GGCGATGGCT
TTCAACCGCT ACCTGGATGC TGATATCGAC AGGAAAAACC CACGTACGGT ACAGCGCGAG
ATCCCAAGAG GTGTGATTAC AGAAAAGAAC GCGCTCATAT TTGTGATCGT GAACTGTCTG
TTGTTCATGG CGGCTACCTG GTTCATTAAT TTCTTATGTT TCCTCTTATC GCCGATAGCA
TTGCTGGTGG TACTGGGTTA TAGTTATACA AAAAGATTCA CCGCGCTTTG TCACCTGGTA
CTGGGATTAG GGCTGTCGCT GGCGCCGGTA GGAGCCTACC TGGCCGTGAC CGGTCACTTT
GCCGTATTGC CGGTATTGCT GTCTGTCCTG GTATTGTGCT GGGTAGCGGG CTTTGATATT
ATCTATTCCC TGCAGGACGA AGACTTTGAT CGTTCCCTTG CGTTAAACTC TATTCCTACC
TGGTTGGGTA AGGCGGGAGC GCTGCATTTC TCCGAAGGGT TACACCTGGT AGCAGGCGCA
TTGGCAGTGA TTATTGGCCT GTATGGTCAG TTCCATTGGT TATATGCCAT CGGCGCACTT
GTATTTATTA TTATGCTGGT GTCACAGCAT CTGTTGGTAA AACCCAATGA TCTGAGCCGT
GTCAATATCG CCTTTATGAC TACAAACGGT ATTGCCAGTG TGGTATTTGC CGTATTCGCC
ATCGCCGATA TGTTCATCAT CGGATAA
 
Protein sequence
MITTVNKYLS LVKFSHTIFA MPFALTGFFI ATIKTDASFS WQLFLLVVLC MVFARSAAMA 
FNRYLDADID RKNPRTVQRE IPRGVITEKN ALIFVIVNCL LFMAATWFIN FLCFLLSPIA
LLVVLGYSYT KRFTALCHLV LGLGLSLAPV GAYLAVTGHF AVLPVLLSVL VLCWVAGFDI
IYSLQDEDFD RSLALNSIPT WLGKAGALHF SEGLHLVAGA LAVIIGLYGQ FHWLYAIGAL
VFIIMLVSQH LLVKPNDLSR VNIAFMTTNG IASVVFAVFA IADMFIIG