| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1864 |
|---|
| Symbol | |
|---|
| ID | 8358015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 2269617 |
|---|
| End bp | 2270228 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644964052 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003121561 |
|---|
| Protein GI | 256420908 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCATAACG GCGAGGCATA TATAACGGGT AGTTGTGTCA TCCGCAACAA CCGGGTGTAC
AGAGATGGTA CATTATTGTG GGAAGCGCCA CAGGAACAGG AATTACCTGA ATTTCTCCGT
GGTGGATACG ATCATTTTTC CGGTCAGTAT CCGAAGTTTC ACAAGATGGA TCCTTTAAGC
AAACTGGGTT GGCTGGCAAC GGAAGTACTG CTGAAAGAGC AGCCGTTGAA CTATGCGGCT
GACAGGGTAG GGCTGGTACT GGCTAATAAA AGCGCCAGTC TGGATACAGA TCTGCGCTAC
TTTGATACAG TAAAGGATAT TGCCAGTCCG GCGTTATTTG TATATACACT GTCCAATATC
GTCATGGGAG AAATCAGCAT CCGTCACGGG TTCAAAGGAG AAAACGCCTT TTTTACTGCG
GATACTTTCG ATGCAGATTT TATCGCTGCC TATGTCGGTC AGTTATTTGC AGAAGAAGCT
ATTGCGGCCT GTATCTGTGG ATGGGTGGAA GTGATGGGAC CTGTGTACGA TGTATTCCTG
TACCGGGTAG AGCGCAGTGG GGGCAGCGTT GTATTCAATG CTGACAATCT GCAAAAAACA
ATAAGTATTT AA
|
|---|
| Protein sequence | MHNGEAYITG SCVIRNNRVY RDGTLLWEAP QEQELPEFLR GGYDHFSGQY PKFHKMDPLS
KLGWLATEVL LKEQPLNYAA DRVGLVLANK SASLDTDLRY FDTVKDIASP ALFVYTLSNI
VMGEISIRHG FKGENAFFTA DTFDADFIAA YVGQLFAEEA IAACICGWVE VMGPVYDVFL
YRVERSGGSV VFNADNLQKT ISI
|
|---|
| |