Gene Cpin_1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1680 
Symbol 
ID8357823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp2027518 
End bp2027967 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content44% 
IMG OID644963860 
Producthypothetical protein 
Protein accessionYP_003121377 
Protein GI256420724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACT ATTCGTCGTA TGATTCTTCC GGAGGCATAC TTGCCGGAGT TTCTGCTGTA 
TTTATTTTAA TTTGGTTGGC CTTTGTCGTA TTTTACATCT ACTGTAGCTG GAGAATATTC
GAGAAAGCAG GTAAACCGGG GTGGGCAAGT ATCGTCCCGA TATATAGCAC TATCGTCATG
CTGGAGATTA TCGGCAAGCC CTGGTGGTAT ATATTTATGT TCTTAATTCC TATTTATGGA
TGGTTCATTT TGCCGATCAT GCTTACGCAT GAGTTCAGCA AAAGCTTTGG AAAGGATATC
GGGTTTACAC TTGGTCTTCT TTTTCTGAGC CCCATCTTTA TTCCTATCAT GGCGTTCAGC
AGTGATATAC GATATATCGG TCCGGGAGGT CGCCCTTCAG GCTCGTCCCT GGATAATCAG
ATAGGAAGTA TCGGTACGCC GGCCGTCTGA
 
Protein sequence
MQDYSSYDSS GGILAGVSAV FILIWLAFVV FYIYCSWRIF EKAGKPGWAS IVPIYSTIVM 
LEIIGKPWWY IFMFLIPIYG WFILPIMLTH EFSKSFGKDI GFTLGLLFLS PIFIPIMAFS
SDIRYIGPGG RPSGSSLDNQ IGSIGTPAV