| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1674 |
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| Symbol | |
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| ID | 8357816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 2018434 |
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| End bp | 2020866 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963854 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_003121371 |
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| Protein GI | 256420718 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGC GGCCACATAG TTCCCTTTTT ATTTACCTGA ACTATTCAAT CATCCTGATG
ATTTCACTCG CGCTGGCTGG ATGTTCCAAT ACAAAATACC TGCAGAAAAA TCAGCTCTTA
TATATCGATG CGGATGTAGA CGTCAAAGGG GAAGCCTCTT CCATTGACAA ACAGGATATC
CGTAGTTCTC TTTACTCCAA ACAGCTGATG CTGCAACAGC CGAACACACT CTTTGTCGGT
ACCCGTTTTA AAGTGTGGCT CTATAACCAG AAACACAACG AGAAAAAATC CAACTGGTTC
TGGAACCTGA TGTTGTCTCC CCGCAACCTG GAAGATCCTG TGATCTATGA TTCTACTAAA
ACAAAAGAAT CGATCAAACG CATGGTCAGC TACCTGAATA ATCAGGGTTA TTTCTATGCC
ACCATCGATC GCGTGGAATC CATCAAAAGG CAGAAAGTCA GCGTGACCTA CAAGGTAAAT
ACCGGCAAAA ACTTCGTGAT CAATAAGATC TATTACGAAA TACCGGATAC CAATCTGCTG
AAAATCGTAA AAGACAACGA AAAGCTGTCG CTGATCAAAA CCGGCGTGCC TTATAAACAG
GAAATACTGG GTAGTGAAAG AGAGCGACTG ATGCGTGTGA TACGTAACGG TGGTTACTAT
AAATTTGACC GCGACGCTAT TGAATTTGAG ATAGATACCC TTCATAAAAG CCTGTTCAGA
AACCTCATGA ATCCATTTGA GGGTATCGTG AACGTGTACA ATGAACGTAA AGGACAGGAC
AGACCTAAAA TGGATATTTC CGTACGTATC TGGCATCCGG AAGATTCCTC TATCCGTTAT
CAGCAATATG TACTGGACAG CATCATTGCC TATCCTGATT ACCCGGTGTA TGGTAATAAT
GCAGACTCTA TTTTCAAAAC CACACAGCGG AAAGAACTGA CGATCCGCTT CCGCCAGAAT
ATTCTGAAAC CCTCCGTTTT ATACAGGTCC ATCCTGTTAA AAAGCGGTGA TATGTTCTCT
CAGCAACGTA CCAATGATGC GATCAACAGG TTGTATGACC TGGGTGCATG GCAGTTTGTA
ACGCTGCAAT ACCGCGAAAG AAAGGATACG CCCAATACAC TCAATACCTA CATTTACCTG
ACGCCAAAAC GCCGCCAGGA AATAGGGGCC AACTTTGAGG TCAGTACGAG CTCGGACTAT
CTTGTGGGTA GTGGTATCAG TTTGAACTAT AAACACCTGA ATATCGGCCA CTCCGCCACA
CAGTTAAATG TGAGTCTGAA TACAGGTATT GAACTGATCC GTTCACAAGG TACCTGGATG
CTGCAATCAC AGGAGATCGG CGGACAGGTC AGTCTGATAT TCCCAAGGTT TATCACACCT
TTCCATATTG CGCAGGGTAC ACGTTCGGCA GTAAGAACCC GACTCACAGC GGGGGTTGAC
TATCTTACCC GTTCTTCGAA GTTTTACATT TCCAACGTAA ATGCATCCTT TGGTTATGAG
TGGAATGCTT CTCCTTATAA ACGCTGGATC GTAAAACCTA TCTCCCTGAA CTATGTAGGT
GTAAACCTGA ATGAGGTATT CCGGGAAACA GTGGTGAACC TGAACCCTTA TCTGAAACGT
AGTTTTGAAC CGGCATTTAT CGGCGGAGAA AACGTCACTT ACATCTACAG CAATAACGAT
GCACTGCATA AGAATCATTA CTCTTACTTC CGTGCAAACG TAGAAGAGTC CGGCGCATGG
CTGAACGGTA TCAACAGTTT GTGGGGTGCT GTAGCCAGCA ACGGGAATGA CCTGGAGACG
ATGACCAATA TGCCGATCGC GAACTTCCTC AAACTGGAAG CGGATTACAG ACATTACTGG
TCACTGACCA GCCACACCGT ACTTGCCACC CGTGCTTATG GCGGTGTGGG CATTCCTTAT
GGCAAATCGG ATGTAATGCC TTATATCCGT CAGTTTACAG CCGGCGGTCC TAACAGTATC
CGTGCGTGGC GACTGCGTAC GCTGGGTCCT GGTGTATTTA AAGACAGTTC GTTAACAGCC
AGTACATTCC CTGATCAGAC GGGTGATATG AAGCTGGAAG CTAATATTGA ATACCGTTTT
GACCTGTTAC GTCTTTTTGA TGGCAGCATT AACCTGAAAG GCGCTACTTT CCTGGATATA
GGTAATATCT GGATGCTGAA GAAAGATACC ACCCGTCCCG GTGGTGAATT CAGATTACAA
AACCTCTACA GAGATCTGGC GGTGGGTACC GGCGCCGGTT TGAGACTGGA TTTCTCCTTC
TTCCTGATCA GGCTTGACTG GGGTGTGCCT GTTAAAGTAC CTTATTTCAA AGGCAACAAG
AGCGGCTGGT ACCTGGGAGA ATGGCAACTG GGTAATGCAG AGTGGCGCAG GAATAACATT
ATCTGGAACA TTGCGATCGG TTATCCCTTC TGA
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| Protein sequence | MQQRPHSSLF IYLNYSIILM ISLALAGCSN TKYLQKNQLL YIDADVDVKG EASSIDKQDI
RSSLYSKQLM LQQPNTLFVG TRFKVWLYNQ KHNEKKSNWF WNLMLSPRNL EDPVIYDSTK
TKESIKRMVS YLNNQGYFYA TIDRVESIKR QKVSVTYKVN TGKNFVINKI YYEIPDTNLL
KIVKDNEKLS LIKTGVPYKQ EILGSERERL MRVIRNGGYY KFDRDAIEFE IDTLHKSLFR
NLMNPFEGIV NVYNERKGQD RPKMDISVRI WHPEDSSIRY QQYVLDSIIA YPDYPVYGNN
ADSIFKTTQR KELTIRFRQN ILKPSVLYRS ILLKSGDMFS QQRTNDAINR LYDLGAWQFV
TLQYRERKDT PNTLNTYIYL TPKRRQEIGA NFEVSTSSDY LVGSGISLNY KHLNIGHSAT
QLNVSLNTGI ELIRSQGTWM LQSQEIGGQV SLIFPRFITP FHIAQGTRSA VRTRLTAGVD
YLTRSSKFYI SNVNASFGYE WNASPYKRWI VKPISLNYVG VNLNEVFRET VVNLNPYLKR
SFEPAFIGGE NVTYIYSNND ALHKNHYSYF RANVEESGAW LNGINSLWGA VASNGNDLET
MTNMPIANFL KLEADYRHYW SLTSHTVLAT RAYGGVGIPY GKSDVMPYIR QFTAGGPNSI
RAWRLRTLGP GVFKDSSLTA STFPDQTGDM KLEANIEYRF DLLRLFDGSI NLKGATFLDI
GNIWMLKKDT TRPGGEFRLQ NLYRDLAVGT GAGLRLDFSF FLIRLDWGVP VKVPYFKGNK
SGWYLGEWQL GNAEWRRNNI IWNIAIGYPF
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