| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1673 |
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| Symbol | |
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| ID | 8357815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 2017657 |
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| End bp | 2018355 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644963853 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_003121370 |
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| Protein GI | 256420717 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGA CTGCTGAAAA AAATATTTAC GAAGAAGGAC AGGTGGTATT GATCAACAAG
CCTTTGAAAT GGACGTCTTT CGATATCGTA AGAAAGATAA GAAACACCAC AAAAGCAAAG
ACTGGTCATG CGGGTACCCT CGATCCGCTG GCGACTGGTC TGCTGATCTG CTGCACAGGT
AAAATGACAA AAAAGATCAA CGAGTACCAG GCACAGGAAA AAGAATATAC CGGTACTTTC
ACTATAGGTG CAACAACGCC CACTTACGAT CTGGAATCTG AACCAACAGA TTTTAAACCA
CTGGACGGTA TCACCGAAGA GCTGATACAT GATACGACAA AACAGTTTAT TGGCGAATTA
CAACAGTTAC CGCCTATTCA CTCTGCGATC AAACAGAATG GTAAACCCAT CTATGAACTG
GCCAGAAAAG GGGTAGAGGT GAAAGTAGAG CCGCGTAACA TCGTCATCAA AGAATTTGAA
ATTACAAACA TTGCATTGCC GGTAATACAT TTCCGCGTTG TATGCAGTAC CGGTACCTAT
ATCCGTTCTC TGGCCAATGA TTTTGGCGCA GCGCTGGGCG TGGGCGGTTA TATGAGCAGT
CTTTGCAGAA CAAGAATCGG TGCGTTTAAG CTGGAAGATG CCTGGGAGAT TGAGAAATTT
GTGGAAGAAC TGGGCGGCAC TTTCAAAGCG AAATCTTAG
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| Protein sequence | MNQTAEKNIY EEGQVVLINK PLKWTSFDIV RKIRNTTKAK TGHAGTLDPL ATGLLICCTG
KMTKKINEYQ AQEKEYTGTF TIGATTPTYD LESEPTDFKP LDGITEELIH DTTKQFIGEL
QQLPPIHSAI KQNGKPIYEL ARKGVEVKVE PRNIVIKEFE ITNIALPVIH FRVVCSTGTY
IRSLANDFGA ALGVGGYMSS LCRTRIGAFK LEDAWEIEKF VEELGGTFKA KS
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