| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1645 |
|---|
| Symbol | |
|---|
| ID | 8357787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 1981866 |
|---|
| End bp | 1982975 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644963825 |
|---|
| Product | carbamoyl phosphate synthase small subunit |
|---|
| Protein accession | YP_003121342 |
|---|
| Protein GI | 256420689 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
|---|
| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCAGA CTAGATCGAT CCAGCCGGCT GTACTGTTAT TAGATGACGG AACAGTATTT
TACGGAAAAG CTTTTGGTAA AATAGGCACC GCCGCCGGTG AATTGTGTTT TAACACTGGA
ATGACAGGAT ACCAGGAAGT ATTTACGGAT CCTTCATACA AAGGCCAGGT CCTGATCATG
AACAATTGTT ACGTTGGTAA CTATGGCGTT AAAAAAGACG ACGTAGAAAG TGACGATGTG
AAGATCAGTG GATTGATATG TAAAAATATC GCTTACAACT ATTCCCGCCA GATGGCTGAC
GGTTCTTTGG AAAAATTCCT GTCAGACAAT AACCTGGTAG CGATCCATGA TGTAGATACC
AGAGCATTGG TTGCTCATAT CCGCAGCAAA GGTGCAATGA ACTGTATTAT TTCTTCGGAG
ATCCTGGATG TAGAACAGCT GAAAACGAAG TTACAGCAGG TTCCTTCTAT GGAAGGTCTG
GCGCTGTGTG CTGAAGTATC TACCAAAGAA GCTTATAATG TAGGTAATCC GGATGCTGAA
ATCCGTATTG CAGTACTGGA TAATGGCGTA AAGCGTAACA TGCTGAAATG CCTCTCCGAA
AAAGGCGCTT ACCTGCAGGT ATTCCCTACA GATACACCAT TTGAAGAGTG TGAAAAATTT
AAACCAAACG CGTATTTCAT CTCTAACGGA CCTGGTGACC CGGCTCCACT GAAATATGCT
GTTGACACTG TTAAAAAGAT CCTGAACGCA AATAAACCAA TGTTCGGTAT CTGTCTCGGA
CATCAGTTGC TGGCGCTGGC AAATGATATC CCTACATATA AAATGCACCA TGGTCACCGC
GGTCTGAACC ACCCGGTAAA GAACCTGGCA ACTGGTCGTT GTGAGATCAC CACCCAGAAC
CACGGTTTTG CGGTAGATCC AAAGGCAATT GCTGCCAGCG AAACAGTAGA AGTAACACAC
GTGAACCTGA ACGATTCTTC TATCGAGGGT ATCCGTATCA AGAATAAACC GGCATTCTCC
GTACAGTACC ATCCGGAATC AACTCCTGGT CCTCACGATA GCCGTTATTT GTTTGATGAC
TTCTTTAACA TGATCAAAGC GAACATGTAA
|
|---|
| Protein sequence | MPQTRSIQPA VLLLDDGTVF YGKAFGKIGT AAGELCFNTG MTGYQEVFTD PSYKGQVLIM
NNCYVGNYGV KKDDVESDDV KISGLICKNI AYNYSRQMAD GSLEKFLSDN NLVAIHDVDT
RALVAHIRSK GAMNCIISSE ILDVEQLKTK LQQVPSMEGL ALCAEVSTKE AYNVGNPDAE
IRIAVLDNGV KRNMLKCLSE KGAYLQVFPT DTPFEECEKF KPNAYFISNG PGDPAPLKYA
VDTVKKILNA NKPMFGICLG HQLLALANDI PTYKMHHGHR GLNHPVKNLA TGRCEITTQN
HGFAVDPKAI AASETVEVTH VNLNDSSIEG IRIKNKPAFS VQYHPESTPG PHDSRYLFDD
FFNMIKANM
|
|---|
| |