Gene Cpin_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1613 
Symbol 
ID8357755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1960638 
End bp1961237 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content46% 
IMG OID644963793 
Producthypothetical protein 
Protein accessionYP_003121310 
Protein GI256420657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA TTCGTCTCTT AACCCTTGCG CTGATGGCTT TATTCATCGG CAGTACTGCT 
TCTGCCCAGA CCCAAAAAGG AAACCTGATG GTAGGTTCCG ACATCACTGA TTTCGGATTT
AATTTCCAGA AGGAGAGTAC GATTTTCCAT GTCACCGTAA ACCCTAAGCT GGCGTATTTC
ATTAAGGATG ATCTTGCGCT GGGTGCATAT GTTAACCTGG GTGTACAGAC GACGGGAGGA
AATGGTACGA ACGTAGATTA TGGTGTAGGA GCGCTGGCGC GTTATTATTT CCAGGACAAG
AACATCCGTA AGATGGAGTT TTCAAAACGC GTACGTTTCT TTGGTGAGGC GAATGCGGGT
TTTGGCGGAA GTAATCCGGC GAGCGGTGCA TCGACCAATG GTGTACAGTT AGGTGTTGGT
CCGGGTTTAT CTTATTTCAT TACGCCGAAT GTTGCATTAG ATGCGTTGGT GAAGTATGAT
GTGATTATTG GGGGAGGTAA TTCCACTACA TCACATCAGT TAAATTTCGG ACTGGGTTTC
CAGATTTTCC TGCCTACTGC GAAGGCGCGT GCGATCATGC GTGAGGAGAT GGGTAAATAA
 
Protein sequence
MKTIRLLTLA LMALFIGSTA SAQTQKGNLM VGSDITDFGF NFQKESTIFH VTVNPKLAYF 
IKDDLALGAY VNLGVQTTGG NGTNVDYGVG ALARYYFQDK NIRKMEFSKR VRFFGEANAG
FGGSNPASGA STNGVQLGVG PGLSYFITPN VALDALVKYD VIIGGGNSTT SHQLNFGLGF
QIFLPTAKAR AIMREEMGK