Gene Cpin_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1583 
Symbol 
ID8357725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1926510 
End bp1927970 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content48% 
IMG OID644963763 
ProductSialate O-acetylesterase 
Protein accessionYP_003121280 
Protein GI256420627 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.128586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGA CCACGTTACT CAAGCCCCTG CTTACCGGGG TGCTATCATG CACACTTATC 
TTAAATAGCT TCGCAGATGT TCGTTTACCC GCTTTGGTCG GTAGTAACAT GGTGTTACAG
CGTAATAAAC CATTAAACAT CTGGGGATGG GCTGATAAGG GAGAAAAAGT GACCGTTTCT
TTTCGTAACG GTGTTTACAA GACCACCACT GCTGCGGATG GAAAATGGAA AGTACAGCTA
CCCGCACAGC AGGCGGGAGG CCCGTATACA ATGACCGTTA CCGGCCATAA TACCATAAAA
CTGGACAACA TTCTGGTAGG TGAAGTATGG ATCGCATCCG GACAATCCAA TATGGAAATG
CCCCTCAAAG GATGGGGTAA AATCCTCAAC CATGACCAGG AAATCGCGGT TGCTAATTAT
CCGGAAATCC GTTTGTTCCA GCTGAAACAC ACTACCAGCA CTGCACCACA GGAAGATGTA
AATCCATGGG ACGGCGGCTG GCAGGCATGT ACGCCACAGA GCATTCCGGA GTTCTCTTCC
GTTGGATATT TCTTTGCCCG TGAGATTTAT ACACACGAGC ATATACCCGT GGGGGTTATC
CACACTTCTT GGGGTGGAAC TGTTGCCGAA GCGTGGACAA GTGGGGAATC TATCAAAAAG
ATCCCGGCAT TCGCAGATAC AGTAAAAGCA TTTGAAAGTC TGCCGACACC TTTGTCTCCT
TCTAATCCGA ATAAAGCCAC CCTGCTTTAT AACGCTATGA TCCATCCGCT GCTGCCGTAT
GCCTTTCGCG GTGTGATCTG GTACCAGGGA GAAGGTAATG CAGAAAGAGC TTACCAGTAC
CGTGAGGTAT TCCCAACCAT GATCAAAGAC TGGCGTAAAC AATGGCATAA CGGCGATTTT
CCTTTCTACT TCGTACAACT GGCCAATTTC AAAGATAAAC AGACACAACC TGTGGAGTCC
GACTGGGCAG AGTTAAGGGA AGCACAATTA ATGACGCTGT CACTGCCTAA TACCGGTATG
GCTACAGCGG TGGATATCGG GGATGCAAAA GATATTCACC CGAAAAATAA ACAGGAAGTA
GGCCGCCGCC TGTCCCTGAT CGCCAGGGCA AAAGTGTATG GGGAAAAAAT ACCCTATTCC
GGTCCGATTT ATCAGTCCAA ACTGATAACG GGCAACAAGG TGACACTGAG CTTCAAAAAT
GCAGATAACG GGCTTGTAAT GAAGAATGGA ACAAGTCTGA AAGGTTTTGA GGTGGCAGGC
GCTGATAAGA AATTCCATTG GGCACAGGCA ACTATCAGTG GTAATCGTGT GATCGTGTCA
AGCAACGAGG TGGATAAACC TGTTGCGGTA CGTTACAGCT GGGCCGACAA TCCGGATGGT
AACCTGTACA GCGGAGCGGG TCTGCCGGCA AGTCCGTTCC GTACAGACAG CTTCCAGGGA
GTGACCTACG GTAAAAAATA A
 
Protein sequence
MQLTTLLKPL LTGVLSCTLI LNSFADVRLP ALVGSNMVLQ RNKPLNIWGW ADKGEKVTVS 
FRNGVYKTTT AADGKWKVQL PAQQAGGPYT MTVTGHNTIK LDNILVGEVW IASGQSNMEM
PLKGWGKILN HDQEIAVANY PEIRLFQLKH TTSTAPQEDV NPWDGGWQAC TPQSIPEFSS
VGYFFAREIY THEHIPVGVI HTSWGGTVAE AWTSGESIKK IPAFADTVKA FESLPTPLSP
SNPNKATLLY NAMIHPLLPY AFRGVIWYQG EGNAERAYQY REVFPTMIKD WRKQWHNGDF
PFYFVQLANF KDKQTQPVES DWAELREAQL MTLSLPNTGM ATAVDIGDAK DIHPKNKQEV
GRRLSLIARA KVYGEKIPYS GPIYQSKLIT GNKVTLSFKN ADNGLVMKNG TSLKGFEVAG
ADKKFHWAQA TISGNRVIVS SNEVDKPVAV RYSWADNPDG NLYSGAGLPA SPFRTDSFQG
VTYGKK