| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1556 |
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| Symbol | |
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| ID | 8357698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1900412 |
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| End bp | 1901080 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644963736 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003121253 |
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| Protein GI | 256420600 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATG CCAGCAAAAA AATCAACATC GCCCTTGTAG ATGACCATAA CCTCTTCCGT
AAAGGCCTGA TCAAGCTCAT TAATATGGGT GATCCTCAGC AGAAATATAA TATTCTTTTT
GAAGCTGAAA ACGGGAACGA CCTGAAGGAT AAAATGATGC AACCGCCGTT TCCGGATATT
ATACTCATGG ACATCGACAT GCCGGATATG GATGGCTATG AAGCCGTCGA CTGGTTACAA
CGTACGCACC CCAGCGTTAA AGTACTGGTA GTTTCTATGG TTGAGTCAGA AAATGCTATC
CTGCGTATGT TACGCCTGGG CGTTAAGGGA TACCTGTCCA AGGATATTGA AGTAGAAGAC
ATGAACCGGG CGCTGGAAGC CATTGCCAGC AACGGGTTTT ATTATTCAGA AATTGCGACT
GAAGTACTGA ATCAGAATCT TATGGGAAAT ATCAAGCCAA ACCCAGCTTC CCTCTATTTA
TCAGAAAATG AACGGGAATT CCTGAAACTT GCTACAACGG AAATGACTTA TCAGCAAATA
GCGGATAAGA TGAACCTGAG TCCGAAAACG ATAGACGGCT ACCGCGAAGC ATTATTTCAG
AAGCTGAATG TAAAGACTAG AGTGACCATG GCCCTGTATG CAGTGAAACA CGGGATTGTG
CAGCTGTAA
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| Protein sequence | MKNASKKINI ALVDDHNLFR KGLIKLINMG DPQQKYNILF EAENGNDLKD KMMQPPFPDI
ILMDIDMPDM DGYEAVDWLQ RTHPSVKVLV VSMVESENAI LRMLRLGVKG YLSKDIEVED
MNRALEAIAS NGFYYSEIAT EVLNQNLMGN IKPNPASLYL SENEREFLKL ATTEMTYQQI
ADKMNLSPKT IDGYREALFQ KLNVKTRVTM ALYAVKHGIV QL
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