| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1538 |
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| Symbol | |
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| ID | 8357679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1882259 |
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| End bp | 1884304 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644963718 |
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| Product | Transketolase central region |
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| Protein accession | YP_003121236 |
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| Protein GI | 256420583 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.244278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGCAT ACCGCTTCAT GCAGCAGGCA GCCCATATGG CGGCTATCTA TGAAGCGAAC
CGCAATATCT GCAAATATGT ACATTCCACT TCCCGCGGGC ATGAGGCGAT TCAGATCGCT
ACTGGTATGC AATTGCAGCC ATGGGATTAT GCCAGTCCTT ATTACCGGGA CGACAGTATG
TTGCTGGCCA TGGGATTCAC GCCTTATGAG CTGATGCTAC AGCTGCTGGC AAAACGGGAT
GATCCGGCAT CTGCAGGTCG TTCTTATTAT TCGCACCCCA GCAGTCTGGA CCCGGACAAG
CCTGTTATTC CACATCAGAG CAGTGCTACG GGTATGCAGG TCATTCCGGC AACAGGCATG
GCGCAGGGTA TCCGGTACCT GGAAAAAACA GGTTCGCCGC TGCTGAAGAC AGGTCCGAAA
GGAGAATTAC CAGTTGTACT TTGTTCGCTG GGAGATGGCA GCGTAACGGA AGGAGAAGTC
AGCGAAGCAT GGCAAAGCGC TGTGTTATGG GAGTTGCCTG TCATCTACCT TGTACAGGAC
AATGAATGGG GGATTTCCGC CAGTTCGGAA GAAACCCGTG TCATGGATGC CTACGAATAT
GCAGCCGGTT TTAAAGGCAT GGAACGCATG CGTGTCGATG GCAGCAACTT CGAAGAATGC
TACCATGCAA TAGGCGCTGC TATCAGCTAT GTAAGACAAG AGCGCAAACC CATGCTGGTA
CACGCCTGTG TCCCTTTATT AGGTCACCAT ACCTCCGGTG TGCGTAAAGA ATGGTACCGC
ACAGACGATG ACCTGGCATT ACATGCAGAA AAAGACCCCT TGCCATTGCT GCGCCAGCGA
CTGCTGGAGA TAGGAGTGGA GGAAAAAGAT CTTTTGGCGA TAGAGTCAGA CACCCCCAAA
TATATCAGTC TCGAATTTGA CAGGGCAACA GAGGCTTTCG AGCCAACCGC TGATACTGTA
GCAGATCACG TTTTTGCCCC GGCAGCAGTA ACCTTTGAAA AAGGAGAGAG ACTACCCGCC
AACGGTAACA AAGTAATGAT GGTGGATGCT GCGCTGCACG CAGTAGAAGA AATTTTACAA
CAATATCCTG AAGCCGTATT TTTCGGTCAG GACGTAGGTC GCCGTCTCGG TGGCGTATTC
CGCGAAGCAG CTACATTGGC TGAGAAATTC GGCGATAACA GGGTATACAA TACCGCCATC
CAGGAAGCCT ATATCGTTGG TTCGACCGCC GGCCTTTCAG CTGTAGGTGT CAAACCTATA
GTAGAGATCC AGTTTGCTGA CTATCTGTAC CCAGGTTTCA ATCAGCTGGT CACAGAAATC
TCCAAATCCT GTTACCTGAG CAATGGAAAG TTCCCCGTGC AGACACTCGT ACGTGTGCCT
ATCGGCGCCT ACGGTGGAGG AGGACCTTAC CATTCCGGTA GCGTGGAATC TACCTTACTG
ACTATCAAAG GCATCAAAGT CGTATATCCG TCTAATGCTG CCGATATGAA AGGTCTCATG
AAAGCAGCCT TCCTGGATCC CAATCCGGTT GTCATGCTGG AACACAAAGG ACTGTACTGG
AGTAAAGTCC CCGGCACGCA GGGCGCTATC ACCATCGAAC CGGACACCGA TTATGTTATC
CCATTGGGTA AAGGAAGAGT CGTACAGCAA GCCCATCCCC GCGACGTCAA AAAAGGCGAT
ACCATCTGTA TCATCACCTA CGGAATGGGC GTATACTGGG CACAGGCTGC CGCTACACAA
TTCCCCGGAC AGGTAGAGAT CATCGATCTG CGCACACTCT TCCCATTAGA TGAAGAACTG
GTGTACAGCA CGGTGCAAAA GCATGGAAAA TGCCTGATCC TGACAGAAGA ACAACTCAAC
AATTCCTTTG CACAGGCATT GGCCGGACGT GTACAACGTG TTTGTTTCAA GTCGCTCGAT
GCACCGGTAT TTACCCTTGG CGCCCTCGAC CTGCCTGCCA TTCCGATTAA TACCATCCTT
GAAAATGCGA TGTTACCGAA TCCTGAAAAG GTGGCGGCTG CAATTAAGGA GTTATTGTCT
TATTAA
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| Protein sequence | MKAYRFMQQA AHMAAIYEAN RNICKYVHST SRGHEAIQIA TGMQLQPWDY ASPYYRDDSM
LLAMGFTPYE LMLQLLAKRD DPASAGRSYY SHPSSLDPDK PVIPHQSSAT GMQVIPATGM
AQGIRYLEKT GSPLLKTGPK GELPVVLCSL GDGSVTEGEV SEAWQSAVLW ELPVIYLVQD
NEWGISASSE ETRVMDAYEY AAGFKGMERM RVDGSNFEEC YHAIGAAISY VRQERKPMLV
HACVPLLGHH TSGVRKEWYR TDDDLALHAE KDPLPLLRQR LLEIGVEEKD LLAIESDTPK
YISLEFDRAT EAFEPTADTV ADHVFAPAAV TFEKGERLPA NGNKVMMVDA ALHAVEEILQ
QYPEAVFFGQ DVGRRLGGVF REAATLAEKF GDNRVYNTAI QEAYIVGSTA GLSAVGVKPI
VEIQFADYLY PGFNQLVTEI SKSCYLSNGK FPVQTLVRVP IGAYGGGGPY HSGSVESTLL
TIKGIKVVYP SNAADMKGLM KAAFLDPNPV VMLEHKGLYW SKVPGTQGAI TIEPDTDYVI
PLGKGRVVQQ AHPRDVKKGD TICIITYGMG VYWAQAAATQ FPGQVEIIDL RTLFPLDEEL
VYSTVQKHGK CLILTEEQLN NSFAQALAGR VQRVCFKSLD APVFTLGALD LPAIPINTIL
ENAMLPNPEK VAAAIKELLS Y
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