Gene Cpin_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1519 
Symbol 
ID8357660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1864786 
End bp1865895 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content48% 
IMG OID644963699 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003121217 
Protein GI256420564 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCAG AAAAGAAACT GCTGACATCA TTGATCACCC CATCCCTCAC ATTTTCAAAC 
AGGGTAGTGA TGGCGCCCAT GAGCAGAAGA CGTTCTTCTA ACGGCGTACC TGGTGCAACG
GCACATATTT ACTACGGACA AAGAGCAGGC GCTGGTTTGA TCATTGCAGA AAATAGTGCG
GTAGCAGCCA ATGGTATCGG GTACCTGGAC GCACCGGGTA TTTATAATGA AGAGCAGAAA
GCAGCCTGGA AAAAGGTGGT AGAGGAAGTC CATGCAGCCA ATGGTAAGAT CTTTATTCAG
CTGGTACATA CAGGCCGTAT TGGTCATCCG CTTAATCACG AAAACAGTGC GCAACTGGTA
GCACCTTCTG TTGTAAGAGC AGCAGGAGAA ATGCGCGTTC CCGGAGATCT ACATTTATCT
ATACCAGCCC CCTTGGAACT CAGCACTGCT GAAACGCAGG AAACGGTACA GGCTTTTGTA
AAGGCAGCTT TAAACGCGAT AGAAGTAGGT TTTGATGGGG TTGAAGTACA TGGTGCACAT
GGTTTTCTCA TAGAACAGTT CCTGCATCCG CATACCAATC AGAGAACAGA CCAATACGGC
GGATCTATCG CTAACCGTGC GCGTTTCCTG CTGGAAGTGA CGCAGGGTAT TGCTGACGCA
ATAGGGAAGG AGCGTACAGG TATCCGTTTA TCACCTTTTG CCGTACTCAA TGACCTGCCT
GCCTATACGG AGGAACTGGC AACTCATCAA CATATTACGG CTGCGCTGGA GGAAATGGGT
ATTCTTTATA TCCACCTGTC CAGTCAACCA TTGAACGGAC AGCCATCCAT TACAGCAGAC
TATATCAGGG ATCTGAGAAG TCATTTCAGT AAGCTGTTGA TCGTCGCGGG TACGCAAACG
GAAGCTTCTG CTGAAGCTTT ACTACAGGCA GGATTGGTGG ATCTGGTGGC ATTTGGTCGT
CCGTTTATCG CCAATCCGGA CCTGGTGGAA CGTTTCAGGC AAAATCAGCC TTTAAGTCCG
GGAGATGTGG ACACTTTTTA TCAGGGAGGA GATAAGGGCT ATGTGGATTA TCCTGTATGG
TGTGAAAAAG CAGACCCTTG TAAGGTATAA
 
Protein sequence
MNSEKKLLTS LITPSLTFSN RVVMAPMSRR RSSNGVPGAT AHIYYGQRAG AGLIIAENSA 
VAANGIGYLD APGIYNEEQK AAWKKVVEEV HAANGKIFIQ LVHTGRIGHP LNHENSAQLV
APSVVRAAGE MRVPGDLHLS IPAPLELSTA ETQETVQAFV KAALNAIEVG FDGVEVHGAH
GFLIEQFLHP HTNQRTDQYG GSIANRARFL LEVTQGIADA IGKERTGIRL SPFAVLNDLP
AYTEELATHQ HITAALEEMG ILYIHLSSQP LNGQPSITAD YIRDLRSHFS KLLIVAGTQT
EASAEALLQA GLVDLVAFGR PFIANPDLVE RFRQNQPLSP GDVDTFYQGG DKGYVDYPVW
CEKADPCKV