Gene Cpin_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1508 
Symbol 
ID8357649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1853842 
End bp1854537 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content45% 
IMG OID644963688 
Producthypothetical protein 
Protein accessionYP_003121206 
Protein GI256420553 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.179982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA GCTTGTTTTT AATTGCTGCG CTACTGGCAG CGGTGAATGT ATTATTCGCA 
CAGGACTGCA AAAACTACTA TTATCTTCTG AATAACGCGG AGGTAGAAAT GAGCATGTTC
GACGCTAAAG GGACGACTGT AGCCAAGAAT GTTTATAAAG TATTGTCTGT CAATAAAGAA
GGGGGCTCTA CGGTATCTGA CTTCACAGTG ACGACAAAAG ACGCCAAAGG CGCCTCCCTG
TCATCCGGCA AAGGAAAGTT CAAATGCACC GGCGGAGAAA TCATGATCGA TATGAAAATG
TCTCTGCCGA ATATGCCGCA GCTGAAAGAC ATGAAGATGG AGTCAGACGG TAGCGCATTT
CTGAACTATC CCGCTACTTT GAAAGAAGGG CAGACCCTGC CGAATGGTTC ATTTGAAATG
AGCGGTAACG CTAATGGTAT GGATATCAGT CTGCAATACC AGGTAACCGA CCGTAAGGTA
GCCGGTAAAG AGAAAATCAC GACTGCCGGT GGCAGCTGGG AATGTTATAA GATCAATTAT
AAGATGAATC TCGGCCTGAA AATGATGGCG ATGAACATGC CGATAGAAAT GAATGCAACA
GAGTGGTTTG CACCGGGTTT TGGAGTAGTG AAGACGGCTA CGTTTAAAGA TGGTAATCCG
GTTGGACATA TGGAGATCAC GAGCTTTAAG AAGTAA
 
Protein sequence
MKKSLFLIAA LLAAVNVLFA QDCKNYYYLL NNAEVEMSMF DAKGTTVAKN VYKVLSVNKE 
GGSTVSDFTV TTKDAKGASL SSGKGKFKCT GGEIMIDMKM SLPNMPQLKD MKMESDGSAF
LNYPATLKEG QTLPNGSFEM SGNANGMDIS LQYQVTDRKV AGKEKITTAG GSWECYKINY
KMNLGLKMMA MNMPIEMNAT EWFAPGFGVV KTATFKDGNP VGHMEITSFK K