Gene Cpin_1452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1452 
Symbol 
ID8357593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1775443 
End bp1776099 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content44% 
IMG OID644963632 
Producthypothetical protein 
Protein accessionYP_003121150 
Protein GI256420497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.309909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGG TACAGATCGG AAAGTGTGTT TATATTATCA ATACGGGAAA GAACCTTTTT 
AAAATAGGCA AGACGCAGGA TCTTCAGAAA AGACTGGCGG CCTATCATAC CCATCTGCCT
GTAATGTTCC GGGTGATCAG GCAGTATGCT GCTGCGAACA TGACTGAACT GGAAGAATGT
CTGCATATCG TATTCCAGCA TAAAAGAGTG AAAGGGGAAT GGTTTGAACT GACCAAAGAA
GATCTTGTTA TCTGCGACAA TATTGCCCGT AATTACGCAC TTACCGAGTT ACATAAACAG
GCCAGAAAGT ATAACGTGAT CCGTTATAGC GACAATCCGC TGTTACAGGT CATGGAAGCC
AACGAAAAAT ACCTGCAGGA TTATTCCCGG GTAGCCCAGG ATATTGAGCT GGGCCTCAGT
ACGGATGAAA TATTTGAACT CAACGAAGGC CAGGTCAGTA AAACAGTGAT TGAAACCGTA
CGCCGCCTGC TGAAATACCG TACCCCTAAT TCTGAATTCC TGAGTAAATG GCTGAAGATT
GTGAATGACC TGGGCGCAGG AATGAGTGAA AATGCCATTC TGGAGAGATA CAAAGGCCAG
ATCAGCCGTA GTACCATACA CATGATCAAA AGAATACTCC GGAACCAGCT TTATTAA
 
Protein sequence
MEQVQIGKCV YIINTGKNLF KIGKTQDLQK RLAAYHTHLP VMFRVIRQYA AANMTELEEC 
LHIVFQHKRV KGEWFELTKE DLVICDNIAR NYALTELHKQ ARKYNVIRYS DNPLLQVMEA
NEKYLQDYSR VAQDIELGLS TDEIFELNEG QVSKTVIETV RRLLKYRTPN SEFLSKWLKI
VNDLGAGMSE NAILERYKGQ ISRSTIHMIK RILRNQLY