Gene Cpin_1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1426 
Symbol 
ID8357567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1737859 
End bp1738719 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content44% 
IMG OID644963606 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_003121124 
Protein GI256420471 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGA CTAAAACAAC TGTGACTGCA GGTTCTGCCA AAGCAACTTC TCATCAACCT 
AAAAAGTCAT CCAATGTATT CGCATTGCTG GCTGTGCCTA TCTGTATCGT TATAGGTGTT
CTCTTCTACA TCTTTGTATT AGGTAGTCCT GATAACTTCC AGGGAGGTAT AAAAGGTCCG
AACGCGCATC CAGTTGAAGA AGGTATCGGA AAATGGTTCG CAACAGTTTA TCAGGGTGGT
GCTATTGTAC CTATTCTTAT TTCTGTATTA CTGATCTGTG TTACTTTCGT AATTGAGCGT
TTCCTGTATA TCAACAAAGC TAAAGGTAAG TTTAGCGGTG CTGATCTGGT AAGAAGAGTT
CAGTTCCACC TGGCTAACAA AAACGTAGAC GCAGCGCTGG CTGAGTGCGA CAAACAGAAA
GGTTCTGTAG GTAACGTAAT GAAAGCTGGT CTGAAGAAGT ACAAAGAAAT GATCACTAAC
ACTGAGCTGG ATACTGAGCA GAAGATCCTG ACTATCAAAA ACGAGATCGA AGAAACAACC
GCTCTTGAAC TGCCAATGAT GGAAAAGAAC CTGGTGTTCC TGTCCACTAT CGCTTCAGTA
GCTACCCTGC TTGGTCTGTT CGGTACAGTA TTGGGTATGA TCAAATCCTT CTCTGCGATG
TCCGCAGGTG GTGCTCCAGA TTCTGCTAAA CTGGCGTTAG GTATCTCCGA GGCGTTGATC
AATACCGCTC TGGGTATCGG TACTTCCGCT ATCGCGATCA TCATGTATAA CTTCTTTACT
ACCAATATCG ATGGCATCAC TTATGCAATC GACGAGTCTG GTTTCACTTT GACTCAGAGC
TTCGCAGCTA ACCACAAATA A
 
Protein sequence
MAETKTTVTA GSAKATSHQP KKSSNVFALL AVPICIVIGV LFYIFVLGSP DNFQGGIKGP 
NAHPVEEGIG KWFATVYQGG AIVPILISVL LICVTFVIER FLYINKAKGK FSGADLVRRV
QFHLANKNVD AALAECDKQK GSVGNVMKAG LKKYKEMITN TELDTEQKIL TIKNEIEETT
ALELPMMEKN LVFLSTIASV ATLLGLFGTV LGMIKSFSAM SAGGAPDSAK LALGISEALI
NTALGIGTSA IAIIMYNFFT TNIDGITYAI DESGFTLTQS FAANHK