Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1426 |
Symbol | |
ID | 8357567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1737859 |
End bp | 1738719 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644963606 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_003121124 |
Protein GI | 256420471 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGA CTAAAACAAC TGTGACTGCA GGTTCTGCCA AAGCAACTTC TCATCAACCT AAAAAGTCAT CCAATGTATT CGCATTGCTG GCTGTGCCTA TCTGTATCGT TATAGGTGTT CTCTTCTACA TCTTTGTATT AGGTAGTCCT GATAACTTCC AGGGAGGTAT AAAAGGTCCG AACGCGCATC CAGTTGAAGA AGGTATCGGA AAATGGTTCG CAACAGTTTA TCAGGGTGGT GCTATTGTAC CTATTCTTAT TTCTGTATTA CTGATCTGTG TTACTTTCGT AATTGAGCGT TTCCTGTATA TCAACAAAGC TAAAGGTAAG TTTAGCGGTG CTGATCTGGT AAGAAGAGTT CAGTTCCACC TGGCTAACAA AAACGTAGAC GCAGCGCTGG CTGAGTGCGA CAAACAGAAA GGTTCTGTAG GTAACGTAAT GAAAGCTGGT CTGAAGAAGT ACAAAGAAAT GATCACTAAC ACTGAGCTGG ATACTGAGCA GAAGATCCTG ACTATCAAAA ACGAGATCGA AGAAACAACC GCTCTTGAAC TGCCAATGAT GGAAAAGAAC CTGGTGTTCC TGTCCACTAT CGCTTCAGTA GCTACCCTGC TTGGTCTGTT CGGTACAGTA TTGGGTATGA TCAAATCCTT CTCTGCGATG TCCGCAGGTG GTGCTCCAGA TTCTGCTAAA CTGGCGTTAG GTATCTCCGA GGCGTTGATC AATACCGCTC TGGGTATCGG TACTTCCGCT ATCGCGATCA TCATGTATAA CTTCTTTACT ACCAATATCG ATGGCATCAC TTATGCAATC GACGAGTCTG GTTTCACTTT GACTCAGAGC TTCGCAGCTA ACCACAAATA A
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Protein sequence | MAETKTTVTA GSAKATSHQP KKSSNVFALL AVPICIVIGV LFYIFVLGSP DNFQGGIKGP NAHPVEEGIG KWFATVYQGG AIVPILISVL LICVTFVIER FLYINKAKGK FSGADLVRRV QFHLANKNVD AALAECDKQK GSVGNVMKAG LKKYKEMITN TELDTEQKIL TIKNEIEETT ALELPMMEKN LVFLSTIASV ATLLGLFGTV LGMIKSFSAM SAGGAPDSAK LALGISEALI NTALGIGTSA IAIIMYNFFT TNIDGITYAI DESGFTLTQS FAANHK
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