Gene Cpin_1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1412 
Symbol 
ID8357532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1686871 
End bp1687719 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content47% 
IMG OID644963571 
Producthypothetical protein 
Protein accessionYP_003121110 
Protein GI256420457 
COG category[S] Function unknown 
COG ID[COG3204] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTAA GATATATTGC GTTCTTTTTT CTGTTCTTGT CCTGTAATGC TTTCAATCAG 
GAAGATAAAC AATATAGCTC TCCAAAGGGT TATAACCTTG CAGAACCTAC CCGTTACCGT
GTACGGCAGT CCATGCAGGA AATCTCCGGG ATTGTACTGG CTCCGGACGA ACACCATATC
ATGGCGATCA ATGACGAGGA GGGCAAGATC TACTCTATCG ACCTGGATAC TGAAAAGCCC
TACCCAACTT CCAAGTTTGA CAAAAGCGGC GACTACGAAG ATCTCGCGAC TACAGGTAAC
GACTGGTTTG TATTAAAGAG TAACGGACAC CTGTACCAGG TGCATGGCAT GTTTACTGAC
ACCGCCGACG CTACGCATTA CAAACTATCT ATCCCCGGCA AAAGGGAATT TGAAAGCCTC
TATTTTGATG CAAGAAACAA CAGCCTGGTA GCTATCTGCA AAGCCTGTGA AGAAGACAAG
AGAGAGGGCT TTACTTCCGC TTACCGGTTC CAGCTGAACA CCATGGAGTA TGACACCGCA
CCTGCATTCC GTATCAATGT AGCTGAGATT GCAAGACTCA CCGGTGGAGA TGTAGGGCAT
TTCAAGCCTT CAGGAGCCGC CGTTCATCCC ATTGAAAATC GCCTGTACAT CGTATCTGCG
GTCAATCGTA TGCTGGTCAT CACTGACCTC GACGGCAAAG TACAGGAGGC TTATAATCTA
CGACATCGCA GATTCGCGCA GCCTGAAGGG ATCTCCTTCA CTGCCAATGG CGACATGTAC
ATATCTAACG AAGCGGTAGA CGAGGCGCAG GCCAATATTC TGAAATTTAA GTACAACTCA
TCACGATGA
 
Protein sequence
MQVRYIAFFF LFLSCNAFNQ EDKQYSSPKG YNLAEPTRYR VRQSMQEISG IVLAPDEHHI 
MAINDEEGKI YSIDLDTEKP YPTSKFDKSG DYEDLATTGN DWFVLKSNGH LYQVHGMFTD
TADATHYKLS IPGKREFESL YFDARNNSLV AICKACEEDK REGFTSAYRF QLNTMEYDTA
PAFRINVAEI ARLTGGDVGH FKPSGAAVHP IENRLYIVSA VNRMLVITDL DGKVQEAYNL
RHRRFAQPEG ISFTANGDMY ISNEAVDEAQ ANILKFKYNS SR